RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 SMAD4Q13485 552 aaKnown RBP13.71□□□□□ -0.22
SRSF5-201ENST00000394366 TRIP4Q15650 581 aaPredicted RBP13.71□□□□□ -0.22
SRSF5-201ENST00000394366 CCDC38Q502W7 563 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 DNAJC21Q5F1R6 531 aaKnown RBP13.71□□□□□ -0.22
SRSF5-201ENST00000394366 ANKRD20A2Q5SQ80 823 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 ANKRD20A1Q5TYW2 823 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 MANEALQ5VSG8 457 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 ANKRD20A3Q5VUR7 823 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 LRRC49Q8IUZ0 686 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 SH2D3CQ8N5H7 860 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 TTC9BQ8N6N2 239 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 ZNF461Q8TAF7 563 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 CCDC110Q8TBZ0 833 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 P2RY11Q96G91 374 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 UHRF1Q96T88 793 aaPredicted RBP13.71□□□□□ -0.22
SRSF5-201ENST00000394366 XAB2Q9HCS7 855 aaKnown RBP13.71□□□□□ -0.22
SRSF5-201ENST00000394366 EIF2B3Q9NR50 452 aaKnown RBP13.71□□□□□ -0.22
SRSF5-201ENST00000394366 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.71□□□□□ -0.222e-7■■■■■ 27.1
SRSF5-201ENST00000394366 TRHDEQ9UKU6 1024 aa13.71□□□□□ -0.22
SRSF5-201ENST00000394366 NOVA2Q9UNW9 492 aaKnown RBP13.71□□□□□ -0.22
SRSF5-201ENST00000394366 GOLGA8MH3BSY2 632 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 RNF103O00237 685 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 MBTPS2O43462 519 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 ABLIM3O94929 683 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 CSH1P0DML2 217 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 CSH2P0DML3 217 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 VAV1P15498 845 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 PPP2R2AP63151 447 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 NR1H3Q13133 447 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 RASA2Q15283 850 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 PARP6Q2NL67 630 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 ANKRD54Q6NXT1 300 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 TDRPQ86YL5 185 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 PALM2Q8IXS6 379 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 BTN2A3PQ96KV6 586 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 FCRL2Q96LA5 508 aaPredicted RBP13.7□□□□□ -0.22
SRSF5-201ENST00000394366 LGMNQ99538 433 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 CAPS2Q9BXY5 557 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 VPS37BQ9H9H4 285 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 ETNK1Q9HBU6 452 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 RXFP1Q9HBX9 757 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 OSER1Q9NX31 292 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 IGSF9Q9P2J2 1179 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 LGALS13Q9UHV8 139 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 MFHAS1Q9Y4C4 1052 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 GREB1Q4ZG55 1949 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 ZNF638Q14966 1978 aaKnown RBP13.7□□□□□ -0.22
SRSF5-201ENST00000394366 CLUHO75153 1309 aa13.7□□□□□ -0.22
SRSF5-201ENST00000394366 UNC80Q8N2C7 3258 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 SPTBN5Q9NRC6 3674 aaKnown RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 EXOC1LA0A1B0GW35 172 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 WASH4PA8MWX3 477 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 MSI1O43347 362 aaKnown RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 SHOX2O60902 331 aaPredicted RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 ADH1AP07327 375 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 APRTP07741 180 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 GSTA2P09210 222 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 MLNP12872 115 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 EPCAMP16422 314 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 HOXB8P17481 243 aaPredicted RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 GARSP41250 739 aaKnown RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 PPP3CCP48454 512 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 LMAN1P49257 510 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 MLLT6P55198 1093 aaPredicted RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 MAGOHP61326 146 aaKnown RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 AUHQ13825 339 aaKnown RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 BBS9Q3SYG4 887 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 TNFAIP8L3Q5GJ75 292 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 C10orf120Q5SQS8 335 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 FNBP1LQ5T0N5 605 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 SNX30Q5VWJ9 437 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 ITPRIPL1Q6GPH6 555 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 RWDD4Q6NW29 188 aaKnown RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 LRRC31Q6UY01 552 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 B4GALNT4Q76KP1 1039 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 SMRP1Q8NCR6 262 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 UHMK1Q8TAS1 419 aaKnown RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 EPS8L3Q8TE67 593 aaKnown RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 SLC22A17Q8WUG5 538 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 NECAB3Q96P71 396 aaPredicted RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 CLSTN3Q9BQT9 956 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 SIK2Q9H0K1 926 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 CRISPLD1Q9H336 500 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 LRRC4CQ9HCJ2 640 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 MARCH2Q9P0N8 246 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 SLC24A2Q9UI40 661 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 HBS1LQ9Y450 684 aaKnown RBP13.69□□□□□ -0.22
SRSF5-201ENST00000394366 REV3LO60673 3130 aa13.69□□□□□ -0.22
SRSF5-201ENST00000394366 TCRBV7S3A2A0A539 114 aa13.68□□□□□ -0.22
SRSF5-201ENST00000394366 ERI2A8K979 691 aaKnown RBP13.68□□□□□ -0.22
SRSF5-201ENST00000394366 TEX28O15482 410 aa13.68□□□□□ -0.22
SRSF5-201ENST00000394366 ATF6P18850 670 aa13.68□□□□□ -0.22
SRSF5-201ENST00000394366 HPDP32754 393 aaPredicted RBP13.68□□□□□ -0.22
SRSF5-201ENST00000394366 ALDH1A3P47895 512 aa13.68□□□□□ -0.22
SRSF5-201ENST00000394366 PGFP49763 221 aa13.68□□□□□ -0.22
SRSF5-201ENST00000394366 CLCN4P51793 760 aa13.68□□□□□ -0.22
SRSF5-201ENST00000394366 NRLP54845 237 aa13.68□□□□□ -0.22
SRSF5-201ENST00000394366 EFEMP1Q12805 493 aa13.68□□□□□ -0.22
SRSF5-201ENST00000394366 RAB33AQ14088 237 aa13.68□□□□□ -0.22
SRSF5-201ENST00000394366 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms