RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 UBE2TQ9NPD8 197 aaPredicted RBP18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 XPO7Q9UIA9 1087 aaKnown RBP18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 SLCO3A1Q9UIG8 710 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 ADAMTS20P59510 1910 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 A0A1B0GVM2 712 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 TCAF2A6NFQ2 919 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 FAM47DPA6NHR8 397 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 KCNK3O14649 394 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 SLC7A4O43246 635 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 LATO43561 262 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 LETM1O95202 739 aaPredicted RBP18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 MOCS2O96007 188 aaPredicted RBP18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 C1SP09871 688 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 CD38P28907 300 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 CTSOP43234 321 aaPredicted RBP18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 ADPRHP54922 357 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 RAP1GAP2Q684P5 730 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 LAYNQ6UX15 382 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 TMPRSS12Q86WS5 348 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 APCDD1Q8J025 514 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 AADATQ8N5Z0 425 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 PDCD7Q8N8D1 485 aaKnown RBP18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 SLC6A18Q96N87 628 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 SLC2A13Q96QE2 648 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 SPAG5Q96R06 1193 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 SRRTQ9BXP5 876 aaKnown RBP18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 EBF2Q9HAK2 575 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 FTSJ1Q9UET6 329 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 CYTH4Q9UIA0 394 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 CTNND2Q9UQB3 1225 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 PLXNA2O75051 1894 aa18.05■□□□□ 0.48
SNRPA1-202ENST00000394082 BAHCC1Q9P281 2608 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 APC2O95996 2303 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 A0A1W2PR77 199 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 MZF1P28698 734 aaPredicted RBP18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 GNA15P30679 374 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 CCR1P32246 355 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 CDK17Q00537 523 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 PDCLQ13371 301 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 SLC45A4Q5BKX6 768 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 RABGAP1LQ5R372 815 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 DSG4Q86SJ6 1040 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 CCAR2Q8N163 923 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 OXR1Q8N573 874 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 MDM1Q8TC05 714 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 FRS2Q8WU20 508 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 GDF3Q9NR23 364 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 CEP83Q9Y592 693 aa18.04■□□□□ 0.48
SNRPA1-202ENST00000394082 THAP12O43422 761 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 WNT1P04628 370 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 ABCB4P21439 1286 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 RXRGP48443 463 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 ARRB1P49407 418 aaPredicted RBP18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 OVGP1Q12889 678 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 EFHC1Q5JVL4 640 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 TRIM65Q6PJ69 517 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 IQCHQ86VS3 1027 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 STK40Q8N2I9 435 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 SAP25Q8TEE9 199 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 RPL10LQ96L21 214 aaKnown RBP18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 TMEM51Q9NW97 253 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 PCDHGC3Q9UN70 934 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 DMTF1Q9Y222 760 aa18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 NYNRINQ9P2P1 1898 aaKnown RBP18.03■□□□□ 0.48
SNRPA1-202ENST00000394082 GTPBP10A4D1E9 387 aaKnown RBP18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 TRABD2BA6NFA1 517 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 ALOX15BO15296 676 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 ATP9BO43861 1147 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 MAGEC1O60732 1142 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 HSF2BPO75031 334 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 IL1BP01584 269 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 HOXB3P14651 431 aaPredicted RBP18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 DRD3P35462 400 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 PSMD8P48556 350 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 SNX16P57768 344 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 COL9A2Q14055 689 aaPredicted RBP18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 SHBQ15464 509 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 C5orf22Q49AR2 442 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 FAM46CQ5VWP2 391 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 CXorf57Q6NSI4 855 aaKnown RBP18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 MFSD2AQ8NA29 543 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 OR14C36Q8NHC7 312 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 ALG14Q96F25 216 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 AASDHPPTQ9NRN7 309 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 APEX2Q9UBZ4 518 aa18.02■□□□□ 0.48
SNRPA1-202ENST00000394082 TP53BP1Q12888 1972 aaPredicted RBP18.02■□□□□ 0.47
SNRPA1-202ENST00000394082 A0A087WV48 116 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 BECN2A8MW95 431 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 TLR4O00206 839 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 ITGAVP06756 1048 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 PDGFRAP16234 1089 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 STX17P56962 302 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 NXPH1P58417 271 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 PITX1P78337 314 aaPredicted RBP18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 NAPEPLDQ6IQ20 393 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 FBXL22Q6P050 247 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 PDZD3Q86UT5 571 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 WDTC1Q8N5D0 677 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 SHC3Q92529 594 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 SERAC1Q96JX3 654 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms