RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 TRABDQ9H4I3 376 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 CCDC134Q9H6E4 229 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 CCSER2Q9H7U1 834 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 SPG21Q9NZD8 308 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 MPP6Q9NZW5 540 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 VANGL2Q9ULK5 521 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 MRPL42Q9Y6G3 142 aaKnown RBP22.72■■□□□ 1.23
HMGA2-203ENST00000393578 IKBKGQ9Y6K9 419 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 SLC12A8A0AV02 714 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 SUN1O94901 812 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 AP2A1O95782 977 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 JCHAINP01591 159 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 C1QAP02745 245 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 SNX30Q5VWJ9 437 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 NUGGCQ68CJ6 796 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 CCNJLQ8IV13 435 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 GSDMBQ8TAX9 411 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 STAMBPL1Q96FJ0 436 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 ZYG11BQ9C0D3 744 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 NDFIP2Q9NV92 336 aa22.72■■□□□ 1.23
HMGA2-203ENST00000393578 IGLV3-10A0A075B6K4 115 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 MAFKO60675 156 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 PIAS1O75925 651 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 BAIAP3O94812 1187 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 SEC24AO95486 1093 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 HSPA8P11142 646 aaKnown RBP22.71■■□□□ 1.23
HMGA2-203ENST00000393578 RHOQP17081 205 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 CYS1Q717R9 158 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 DDX53Q86TM3 631 aaKnown RBP22.71■■□□□ 1.23
HMGA2-203ENST00000393578 SMC6Q96SB8 1091 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 NAT9Q9BTE0 207 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 PCDHA11Q9Y5I1 949 aa22.71■■□□□ 1.23
HMGA2-203ENST00000393578 ARHGAP42A6NI28 874 aa22.7■■□□□ 1.23
HMGA2-203ENST00000393578 CCNB1P14635 433 aa22.7■■□□□ 1.23
HMGA2-203ENST00000393578 SLC18A1P54219 525 aa22.7■■□□□ 1.23
HMGA2-203ENST00000393578 MPP2Q14168 576 aa22.7■■□□□ 1.23
HMGA2-203ENST00000393578 KCTD11Q693B1 232 aa22.7■■□□□ 1.23
HMGA2-203ENST00000393578 ARHGAP36Q6ZRI8 547 aa22.7■■□□□ 1.23
HMGA2-203ENST00000393578 PRPF39Q86UA1 669 aaKnown RBP22.7■■□□□ 1.23
HMGA2-203ENST00000393578 UMODL1-AS1Q8N2C9 162 aa22.7■■□□□ 1.23
HMGA2-203ENST00000393578 PRMT1Q99873 361 aaKnown RBP22.7■■□□□ 1.23
HMGA2-203ENST00000393578 NKIRAS1Q9NYS0 192 aa22.7■■□□□ 1.23
HMGA2-203ENST00000393578 HBS1LQ9Y450 684 aaKnown RBP22.7■■□□□ 1.23
HMGA2-203ENST00000393578 SHROOM3Q8TF72 1996 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 FAM47DPA6NHR8 397 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 MATN3O15232 486 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 PRPF4O43172 522 aaKnown RBP eCLIP22.7■■□□□ 1.22
HMGA2-203ENST00000393578 INHBAP08476 426 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 CSH1P0DML2 217 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 CSH2P0DML3 217 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 NFKB1P19838 968 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 STEAP4Q687X5 459 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 TIGD7Q6NT04 549 aaPredicted RBP22.7■■□□□ 1.22
HMGA2-203ENST00000393578 LRRC6Q86X45 466 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 DNAJC5GQ8N7S2 189 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 ZNF512Q96ME7 567 aaPredicted RBP22.7■■□□□ 1.22
HMGA2-203ENST00000393578 TMEM248Q9NWD8 314 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 DNMT3LQ9UJW3 386 aa22.7■■□□□ 1.22
HMGA2-203ENST00000393578 SMG5Q9UPR3 1016 aaKnown RBP22.7■■□□□ 1.22
HMGA2-203ENST00000393578 URODP06132 367 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 ACRP10323 421 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 ATP5C1P36542 298 aaKnown RBP22.69■■□□□ 1.22
HMGA2-203ENST00000393578 NDST2P52849 883 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 SESN2P58004 480 aaPredicted RBP22.69■■□□□ 1.22
HMGA2-203ENST00000393578 SLC26A11Q86WA9 606 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 MZB1Q8WU39 189 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 CHMP6Q96FZ7 201 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 CYP4F11Q9HBI6 524 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 SSU72Q9NP77 194 aaKnown RBP22.69■■□□□ 1.22
HMGA2-203ENST00000393578 IQANK1A0A1B0GTG1 560 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 CACNG3O60359 315 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 HMBSP08397 361 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 HMGA1P17096 107 aaKnown RBP22.69■■□□□ 1.22
HMGA2-203ENST00000393578 MGAT1P26572 445 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 ALDH1A3P47895 512 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 RAB33AQ14088 237 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 PRPSAP1Q14558 356 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 CASC4Q6P4E1 433 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 FOXR1Q6PIV2 292 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 CNTD1Q8N815 330 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 ANKRD42Q8N9B4 389 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 ZNF473Q8WTR7 871 aaKnown RBP22.69■■□□□ 1.22
HMGA2-203ENST00000393578 DYDC1Q8WWB3 177 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 MYRFLQ96LU7 910 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 YME1L1Q96TA2 773 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 IL12RB2Q99665 862 aa22.69■■□□□ 1.22
HMGA2-203ENST00000393578 A0A1W2PPM1 405 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 ZNF840PA6NDX5 716 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 DRGXA6NNA5 263 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 PAPOLAP51003 745 aaKnown RBP22.68■■□□□ 1.22
HMGA2-203ENST00000393578 HNRNPH2P55795 449 aaKnown RBP22.68■■□□□ 1.22
HMGA2-203ENST00000393578 SPARCL1Q14515 664 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 RAP1GAP2Q684P5 730 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 FBXL22Q6P050 247 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 KLHDC10Q6PID8 442 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 MGARPQ8TDB4 240 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 ARNTL2Q8WYA1 636 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 SGSM3Q96HU1 749 aa22.68■■□□□ 1.22
HMGA2-203ENST00000393578 ZNF317Q96PQ6 595 aaPredicted RBP22.68■■□□□ 1.22
HMGA2-203ENST00000393578 MLPHQ9BV36 600 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms