RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 FAM222BQ8WU58 562 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 NT5C1BQ96P26 610 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 F2RL3Q96RI0 385 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 SLC13A1Q9BZW2 595 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 ZCWPW1Q9H0M4 648 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 RXFP3Q9NSD7 469 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 PAXBP1Q9Y5B6 917 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 IGHV4OR15-8A0A075B7B6 117 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 TRBV5-7A0A0A0MS05 114 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 E9PSI1 815 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 EYA2O00167 538 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 RAB27BO00194 218 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 RASSF9O75901 435 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 CNTN5O94779 1100 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 LCKP06239 509 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 KITP10721 976 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 NR1D1P20393 614 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 TGM2P21980 687 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 YY1P25490 414 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 ACVR2AP27037 513 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 C21orf33P30042 268 aaPredicted RBP1.29□□□□□ -2.2
SNORA40-201ENST00000388090 SLC16A2P36021 539 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 SLC29A2Q14542 456 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 SETMARQ53H47 684 aaPredicted RBP1.29□□□□□ -2.2
SNORA40-201ENST00000388090 ACSM6Q6P461 480 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 AMER3Q8N944 861 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 CADM4Q8NFZ8 388 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 GLMPQ8WWB7 406 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 LGALS12Q96DT0 336 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 ABHD14AQ9BUJ0 271 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 CCDC8Q9H0W5 538 aaPredicted RBP1.29□□□□□ -2.2
SNORA40-201ENST00000388090 EBF2Q9HAK2 575 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 FBRSL1Q9HCM7 1045 aaKnown RBP1.29□□□□□ -2.2
SNORA40-201ENST00000388090 TP53TG3Q9ULZ0 132 aa1.29□□□□□ -2.2
SNORA40-201ENST00000388090 A0A0U1RQJ8 604 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 TRIM43BA6NCK2 446 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 SAC3D1A6NKF1 404 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 KRTAP1-4P0C5Y4 121 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 TPH1P17752 444 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 RXRAP19793 462 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 KCNA5P22460 613 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 CNGA1P29973 690 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 PPP3CCP48454 512 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 DRG2P55039 364 aaKnown RBP1.28□□□□□ -2.2
SNORA40-201ENST00000388090 KCNC3Q14003 757 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 PLAG1Q6DJT9 500 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 MZT2AQ6P582 158 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 RSRC2Q7L4I2 434 aaKnown RBP1.28□□□□□ -2.2
SNORA40-201ENST00000388090 DENND1CQ8IV53 801 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 FBXL16Q8N461 479 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 SRBD1Q8N5C6 995 aaKnown RBP1.28□□□□□ -2.2
SNORA40-201ENST00000388090 ANKRD52Q8NB46 1076 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 SREK1Q8WXA9 508 aaKnown RBP1.28□□□□□ -2.2
SNORA40-201ENST00000388090 TRIM43Q96BQ3 446 aaPredicted RBP1.28□□□□□ -2.2
SNORA40-201ENST00000388090 WDR24Q96S15 920 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 STK31Q9BXU1 1019 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 ZMAT3Q9HA38 289 aaKnown RBP1.28□□□□□ -2.2
SNORA40-201ENST00000388090 ZNF304Q9HCX3 659 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 TXNRD2Q9NNW7 524 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.28□□□□□ -2.2
SNORA40-201ENST00000388090 STK32BQ9NY57 414 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 RGS17Q9UGC6 210 aaPredicted RBP1.28□□□□□ -2.2
SNORA40-201ENST00000388090 HPSEQ9Y251 543 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 SLC4A4Q9Y6R1 1079 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 CROCCQ5TZA2 2017 aa1.28□□□□□ -2.2
SNORA40-201ENST00000388090 TNKSO95271 1327 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 A0A1W2PPL8 197 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 TBX3O15119 743 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 KAT7O95251 611 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 WEE2P0C1S8 567 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 IL1R1P14778 569 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 DRD1P21728 446 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 CBLP22681 906 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 MMP8P22894 467 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 AVPR1AP37288 418 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 MXI1P50539 228 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 CLCN3P51790 818 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 MTMR1Q13613 665 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 GALNT3Q14435 633 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 PTPN21Q16825 1174 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 TCTE1Q5JU00 501 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 ZDHHC20Q5W0Z9 365 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 PGBD5Q8N414 524 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 MIGA1Q8NAN2 632 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 ZNF248Q8NDW4 579 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 ZNF689Q96CS4 500 aaPredicted RBP1.27□□□□□ -2.21
SNORA40-201ENST00000388090 FAM227BQ96M60 508 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 PTPRHQ9HD43 1115 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 GABBR1Q9UBS5 961 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 MID2Q9UJV3 735 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 HDAC9Q9UKV0 1011 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 CAPN11Q9UMQ6 739 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 ZNF711Q9Y462 761 aa1.27□□□□□ -2.21
SNORA40-201ENST00000388090 M0QZQ0 153 aa1.26□□□□□ -2.21
SNORA40-201ENST00000388090 MSI1O43347 362 aaKnown RBP1.26□□□□□ -2.21
SNORA40-201ENST00000388090 ATP1A1P05023 1023 aaKnown RBP1.26□□□□□ -2.21
SNORA40-201ENST00000388090 TXNP10599 105 aaKnown RBP1.26□□□□□ -2.21
SNORA40-201ENST00000388090 ALADP13716 330 aa1.26□□□□□ -2.21
SNORA40-201ENST00000388090 BTF3P20290 206 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms