RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 CLPBQ9H078 707 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 COMMD3-BMI1R4GMX3 469 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 COL1A2P08123 1366 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 TTLL13PA6NNM8 815 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 TAF4O00268 1085 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 SNX3O60493 162 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 RARAP10276 462 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ST3GAL1Q11201 340 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ILF2Q12905 390 aaKnown RBP14.24□□□□□ -0.13
SNPH-201ENST00000381867 AMHR2Q16671 573 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 NEK10Q6ZWH5 1172 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 GPR142Q7Z601 462 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 NT5DC3Q86UY8 548 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 C10orf53Q8N6V4 93 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 PYDC1Q8WXC3 89 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 RPRD1AQ96P16 312 aaPredicted RBP14.24□□□□□ -0.13
SNPH-201ENST00000381867 CPNE1Q99829 537 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 SLC25A23Q9BV35 468 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 UBXN6Q9BZV1 441 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 SETD4Q9NVD3 440 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 YDJCA8MPS7 323 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 UNC5CO95185 931 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 MT-CO1P00395 513 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 PROCP04070 461 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 URODP06132 367 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 CCDC130P13994 396 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 CYP2F1P24903 491 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ITGADQ13349 1161 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 NAB1Q13506 487 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 RNF43Q68DV7 783 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 FAM180AQ6UWF9 173 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 CYP2R1Q6VVX0 501 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 BRSK2Q8IWQ3 736 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 SYTL1Q8IYJ3 562 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 UCMAQ8WVF2 138 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 PORCNQ9H237 461 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ELOVL6Q9H5J4 265 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ZNF446Q9NWS9 450 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 C15orf38-AP3S2A0A0A6YYH1 394 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.24□□□□□ -0.13
SNPH-201ENST00000381867 TMEM88BA6NKF7 163 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 TMEM114B3SHH9 223 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 SPATA31C2B4DYI2 1134 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 NCAM2O15394 837 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ETS1P14921 441 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ADRA1DP25100 572 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 SSTR1P30872 391 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ROR2Q01974 943 aaKnown RBP14.24□□□□□ -0.13
SNPH-201ENST00000381867 ZNF177Q13360 481 aaPredicted RBP14.24□□□□□ -0.13
SNPH-201ENST00000381867 SHROOM1Q2M3G4 852 aaPredicted RBP14.24□□□□□ -0.13
SNPH-201ENST00000381867 SPANXN3Q5MJ09 141 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ARPINQ7Z6K5 226 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 TRIM48Q8IWZ4 208 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ABRAQ8N0Z2 381 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 TBC1D13Q9NVG8 400 aa14.24□□□□□ -0.13
SNPH-201ENST00000381867 ZNF541Q9H0D2 1346 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 TRIM43BA6NCK2 446 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 WTIPA6NIX2 430 aaPredicted RBP14.23□□□□□ -0.13
SNPH-201ENST00000381867 DCXO43602 365 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 SLC2A4P14672 509 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 CRABP2P29373 138 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 HK2P52789 917 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 PLD1Q13393 1074 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 KYAT3Q6YP21 454 aaKnown RBP14.23□□□□□ -0.13
SNPH-201ENST00000381867 ACOT1Q86TX2 421 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 OOSP2Q86WS3 158 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 ADGRF2Q8IZF7 708 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 RNF148Q8N7C7 305 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 RXFP2Q8WXD0 754 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 RRN3Q9NYV6 651 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 SORCS3Q9UPU3 1222 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 NID2Q14112 1375 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 CCDC154A6NI56 674 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 VPS4BO75351 444 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 MBL2P11226 248 aaPredicted RBP14.23□□□□□ -0.13
SNPH-201ENST00000381867 CDC25CP30307 473 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 CCNG1P51959 295 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 KPNA1P52294 538 aaPredicted RBP14.23□□□□□ -0.13
SNPH-201ENST00000381867 SEZ6Q53EL9 994 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 ERAP2Q6P179 960 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 CASP12Q6UXS9 341 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 EPHX4Q8IUS5 362 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 ZCCHC9Q8N567 271 aaKnown RBP14.23□□□□□ -0.13
SNPH-201ENST00000381867 KAT2BQ92831 832 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 RIBC2Q9H4K1 309 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 MRPL39Q9NYK5 338 aaKnown RBP14.23□□□□□ -0.13
SNPH-201ENST00000381867 UMODL1Q5DID0 1318 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 LYPLA2O95372 231 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 JCHAINP01591 159 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 MSH3P20585 1137 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 ITGALP20701 1170 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 TKTP29401 623 aaKnown RBP14.23□□□□□ -0.13
SNPH-201ENST00000381867 SLC12A3P55017 1021 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 MARK2Q7KZI7 788 aaKnown RBP14.23□□□□□ -0.13
SNPH-201ENST00000381867 NECAB2Q7Z6G3 386 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 DEFB128Q7Z7B8 93 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 ZSCAN18Q8TBC5 510 aaPredicted RBP14.23□□□□□ -0.13
SNPH-201ENST00000381867 GNG14A0A1W2PPG7 69 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 CYB561D2O14569 222 aa14.23□□□□□ -0.13
SNPH-201ENST00000381867 FEN1P39748 380 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms