RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 COLEC12Q5KU26 742 aa17.94■□□□□ 0.46
HMGN1-203ENST00000380748 GRAMD1CQ8IYS0 662 aa17.94■□□□□ 0.46
HMGN1-203ENST00000380748 EXD3Q8N9H8 876 aa17.94■□□□□ 0.46
HMGN1-203ENST00000380748 FAM131CQ96AQ9 280 aa17.94■□□□□ 0.46
HMGN1-203ENST00000380748 RPL10LQ96L21 214 aaKnown RBP17.94■□□□□ 0.46
HMGN1-203ENST00000380748 IRX2Q9BZI1 471 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-203ENST00000380748 MAGEF1Q9HAY2 307 aa17.94■□□□□ 0.46
HMGN1-203ENST00000380748 LRRC4Q9HBW1 653 aa17.94■□□□□ 0.46
HMGN1-203ENST00000380748 CEP83Q9Y592 693 aa17.94■□□□□ 0.46
HMGN1-203ENST00000380748 HEMK1Q9Y5R4 338 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-203ENST00000380748 U3KQA8 63 aa17.94■□□□□ 0.46
HMGN1-203ENST00000380748 COL27A1Q8IZC6 1860 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-203ENST00000380748 XPO1O14980 1071 aaKnown RBP17.93■□□□□ 0.46
HMGN1-203ENST00000380748 SPTLC2O15270 562 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 POLR2DO15514 142 aaKnown RBP17.93■□□□□ 0.46
HMGN1-203ENST00000380748 PLRG1O43660 514 aaKnown RBP17.93■□□□□ 0.46
HMGN1-203ENST00000380748 AFMP43652 599 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 NUMBP49757 651 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 ECT2LQ008S8 904 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 ELAVL3Q14576 367 aaKnown RBP17.93■□□□□ 0.46
HMGN1-203ENST00000380748 ISXQ2M1V0 245 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 MSANTD2Q6P1R3 559 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 IGF2-ASQ6U949 168 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 TRIM69Q86WT6 500 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 CFAP52Q8N1V2 620 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 KLHDC7BQ96G42 594 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 APOLD1Q96LR9 279 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 MYOCQ99972 504 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 FAM117AQ9C073 453 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 ABCG4Q9H172 646 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 ABCC13Q9NSE7 274 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 PPP4R2Q9NY27 417 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 FRMD4BQ9Y2L6 1034 aa17.93■□□□□ 0.46
HMGN1-203ENST00000380748 PMS2P1A4D2B8 440 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 PRAMEF26H0Y7S4 382 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 KLRC4O43908 158 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 GP1BAP07359 652 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 THEGLP0DJG4 465 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 RBMS1P29558 406 aaKnown RBP17.92■□□□□ 0.46
HMGN1-203ENST00000380748 NUDT1P36639 197 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 NFKB2Q00653 900 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 KCNMA1Q12791 1236 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 C6orf132Q5T0Z8 1188 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 NUGGCQ68CJ6 796 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 CCDC81Q6ZN84 652 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 UNC45BQ8IWX7 931 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 APCDD1Q8J025 514 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 SIX6OS1Q8N1H7 587 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 MAPK15Q8TD08 544 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 SEMA4DQ92854 862 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 ATXN7L3BQ96GX2 97 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 SLC46A1Q96NT5 459 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 NUCKS1Q9H1E3 243 aaKnown RBP17.92■□□□□ 0.46
HMGN1-203ENST00000380748 KDM4CQ9H3R0 1056 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 KLHL11Q9NVR0 708 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 TSPAN16Q9UKR8 245 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 SARDHQ9UL12 918 aa17.92■□□□□ 0.46
HMGN1-203ENST00000380748 AHCTF1Q8WYP5 2266 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 TYW5A2RUC4 315 aaKnown RBP17.91■□□□□ 0.46
HMGN1-203ENST00000380748 PDXKO00764 312 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 TERTO14746 1132 aaKnown RBP17.91■□□□□ 0.46
HMGN1-203ENST00000380748 LZTS3O60299 673 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-203ENST00000380748 PIAS2O75928 621 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 TBX4P57082 545 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 CUL4AQ13619 759 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 SETMARQ53H47 684 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-203ENST00000380748 AGBL4Q5VU57 503 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 RNF219Q5W0B1 726 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-203ENST00000380748 TMEM145Q8NBT3 493 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 CCDC150Q8NCX0 1101 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 PRR11Q96HE9 360 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-203ENST00000380748 TJP2Q9UDY2 1190 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
HMGN1-203ENST00000380748 KIF26BQ2KJY2 2108 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 LRRK2Q5S007 2527 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 SLC7A4O43246 635 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 PPP6R2O75170 966 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 LUC7L3O95232 432 aaKnown RBP17.9■□□□□ 0.46
HMGN1-203ENST00000380748 MOCS3O95396 460 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 ALPPL2P10696 532 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 PDIA4P13667 645 aaKnown RBP17.9■□□□□ 0.46
HMGN1-203ENST00000380748 LCP1P13796 627 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 PRLRP16471 622 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 TGM2P21980 687 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 DAOAP59103 153 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 BST2Q10589 180 aaKnown RBP17.9■□□□□ 0.46
HMGN1-203ENST00000380748 CNTN1Q12860 1018 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 CLN3Q13286 438 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 ZSCAN23Q3MJ62 389 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 CCDC117Q8IWD4 279 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-203ENST00000380748 UBA3Q8TBC4 463 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 IFI44Q8TCB0 444 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 KLK6Q92876 244 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 NLGN3Q9NZ94 848 aa17.9■□□□□ 0.46
HMGN1-203ENST00000380748 CDRT15L2A8MXV6 281 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 SLC31A1O15431 190 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 CUTAO60888 179 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 GABBR2O75899 941 aa17.89■□□□□ 0.45
HMGN1-203ENST00000380748 CENPBP07199 599 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-203ENST00000380748 LINC00303Q3SY05 128 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms