RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 TOP6BLQ8N6T0 577 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 ACVR1CQ8NER5 493 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 NPLOC4Q8TAT6 608 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 ZNF669Q96BR6 464 aaPredicted RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 MFSD3Q96ES6 412 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 SHCBP1LQ9BZQ2 653 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 DNAJC28Q9NX36 388 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 KLHL8Q9P2G9 620 aaPredicted RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 STAP1Q9ULZ2 295 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 IPPQ9Y573 584 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.18□□□□□ -0.62
BEST1-201ENST00000378043 G3V2L1 256 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 GABRDO14764 452 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 ZBTB24O43167 697 aaPredicted RBP11.18□□□□□ -0.62
BEST1-201ENST00000378043 DYNC1LI2O43237 492 aaPredicted RBP11.18□□□□□ -0.62
BEST1-201ENST00000378043 MAP3K7O43318 606 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 USP1O94782 785 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 CPA3P15088 417 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 SP100P23497 879 aaPredicted RBP11.18□□□□□ -0.62
BEST1-201ENST00000378043 LIMK2P53671 638 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 MAP3K7CLP57077 242 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 IRF9Q00978 393 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 GRB14Q14449 540 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 PRAMEF19Q5SWL8 479 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 IQSEC1Q6DN90 963 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 OR52E8Q6IFG1 317 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 GPRIN1Q7Z2K8 1008 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 STRA8Q7Z7C7 330 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 PHTF2Q8N3S3 785 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 PHC3Q8NDX5 983 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 SLC7A14Q8TBB6 771 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 GTF3C2Q8WUA4 911 aaPredicted RBP11.18□□□□□ -0.62
BEST1-201ENST00000378043 GATA6Q92908 595 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 LENG1Q96BZ8 264 aaPredicted RBP11.18□□□□□ -0.62
BEST1-201ENST00000378043 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 MCMBPQ9BTE3 642 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 MLPHQ9BV36 600 aaPredicted RBP11.18□□□□□ -0.62
BEST1-201ENST00000378043 ULBP1Q9BZM6 244 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 LRRC40Q9H9A6 602 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 CAB39LQ9H9S4 337 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 LRRC4Q9HBW1 653 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 CRTAC1Q9NQ79 661 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 TXNDC16Q9P2K2 825 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 VANGL2Q9ULK5 521 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.18□□□□□ -0.62
BEST1-201ENST00000378043 TREHO43280 583 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 CIB2O75838 187 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 KLHL2O95198 593 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 AXLP30530 894 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 CACNA2D1P54289 1103 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 PPIDQ08752 370 aaKnown RBP11.18□□□□□ -0.62
BEST1-201ENST00000378043 GRIK3Q13003 919 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 USP4Q13107 963 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 ANKRD20A4Q4UJ75 823 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 HSP90AA5PQ58FG0 334 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 CERCAMQ5T4B2 595 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 TMCO4Q5TGY1 634 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 PGM2L1Q6PCE3 622 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 CLEC14AQ86T13 490 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.18□□□□□ -0.62
BEST1-201ENST00000378043 PPFIBP2Q8ND30 876 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 KCNK16Q96T55 309 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 TTC1Q99614 292 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 SLC24A3Q9HC58 644 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 CASS4Q9NQ75 786 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 DLGAP2Q9P1A6 1054 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 ANGPTL2Q9UKU9 493 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 PCDHB12Q9Y5F1 795 aa11.18□□□□□ -0.62
BEST1-201ENST00000378043 CD1EP15812 388 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 CYP2B6P20813 491 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 YY1P25490 414 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 COPAP53621 1224 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 BTKQ06187 659 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 SCAPQ12770 1279 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 PEX6Q13608 980 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 PDPK2PQ6A1A2 396 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 SIX6OS1Q8N1H7 587 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 ZNF781Q8N8C0 355 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 ZMIZ2Q8NF64 920 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 ZSCAN18Q8TBC5 510 aaPredicted RBP11.17□□□□□ -0.62
BEST1-201ENST00000378043 MAPK15Q8TD08 544 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 PPP4R1Q8TF05 950 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 DPF3Q92784 378 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 MOCOSQ96EN8 888 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 IFT43Q96FT9 208 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 SLC9A7Q96T83 725 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 FERMT1Q9BQL6 677 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 YIPF3Q9GZM5 350 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 GPAMQ9HCL2 828 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 DDX43Q9NXZ2 648 aaKnown RBP11.17□□□□□ -0.62
BEST1-201ENST00000378043 DNAJB4Q9UDY4 337 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 CCDC189A1A4V9 331 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 MEIS3P2A8K0S8 358 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 XPOTO43592 962 aaKnown RBP11.17□□□□□ -0.62
BEST1-201ENST00000378043 BUD23O43709 281 aaKnown RBP11.17□□□□□ -0.62
BEST1-201ENST00000378043 ZBTB14O43829 449 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 MX2P20592 715 aa11.17□□□□□ -0.62
BEST1-201ENST00000378043 SPRP35270 261 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms