RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 UCMAQ8WVF2 138 aa8.94□□□□□ -0.98
PCDH9-202ENST00000377865 NSMCE2Q96MF7 247 aa8.94□□□□□ -0.98
PCDH9-202ENST00000377865 ZNF556Q9HAH1 456 aa8.94□□□□□ -0.98
PCDH9-202ENST00000377865 ANAPC2Q9UJX6 822 aa8.94□□□□□ -0.98
PCDH9-202ENST00000377865 COL14A1Q05707 1796 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 ROBO1Q9Y6N7 1651 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 LACTBL1A8MY62 500 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 CDC16Q13042 620 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 NRF1Q16656 503 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 KCTD19Q17RG1 926 aaPredicted RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 BROXQ5VW32 411 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 UNC93AQ86WB7 457 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 AADATQ8N5Z0 425 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 DCAKDQ8WVC6 231 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 SERAC1Q96JX3 654 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 MAF1Q9H063 256 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 SDCBP2Q9H190 292 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 ZNF408Q9H9D4 720 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 PNPOQ9NVS9 261 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 CICQ96RK0 1608 aaPredicted RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 FAM95CA0A1B0GW59 222 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 ADCY6O43306 1168 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 CCDC159P0C7I6 412 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 ATP5F1P24539 256 aaPredicted RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 TNK2Q07912 1038 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 CSTF3Q12996 717 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 GRIK3Q13003 919 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 TTC7BQ86TV6 843 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 PDPRQ8NCN5 879 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 S100ZQ8WXG8 99 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 RCN3Q96D15 328 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 IKZF4Q9H2S9 585 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 EBF3Q9H4W6 596 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 TAS2R1Q9NYW7 299 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 POLG2Q9UHN1 485 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 SH3GLB1Q9Y371 365 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 IQCA1LA6NCM1 817 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 MAPK1P28482 360 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 CHRNA5P30532 468 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 IFNA8P32881 189 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 MRPL28Q13084 256 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 UGCGQ16739 394 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 KIZQ2M2Z5 673 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 AARS2Q5JTZ9 985 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 PCID2Q5JVF3 399 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 CNTD1Q8N815 330 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 POP5Q969H6 163 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 MUC13Q9H3R2 512 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 TJP2Q9UDY2 1190 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 TRMT6Q9UJA5 497 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 C1orf232A0A0U1RR37 186 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 EVPLLA8MZ36 301 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 PSMB4P28070 264 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 POU5F1Q01860 360 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 SPIRE1Q08AE8 756 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 MAD2L1Q13257 205 aaPredicted RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 DMC1Q14565 340 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 MAPRE1Q15691 268 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 CYP51A1Q16850 503 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 ATP6AP1LQ52LC2 224 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 STXBP5Q5T5C0 1151 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 PIWIL4Q7Z3Z4 852 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 XYLT1Q86Y38 959 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 CCDC103Q8IW40 242 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 MICU2Q8IYU8 434 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 AFG1LQ8WV93 481 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 ACO2Q99798 780 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 MRPL57Q9BQC6 102 aaKnown RBP8.93□□□□□ -0.98
PCDH9-202ENST00000377865 V9GYQ6 96 aa8.93□□□□□ -0.98
PCDH9-202ENST00000377865 PMPCBO75439 489 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 TRMUO75648 421 aaKnown RBP8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ALOX5P09917 674 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ITGB5P18084 799 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 CLCN2P51788 898 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 RUNX1T1Q06455 604 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 NEDD8Q15843 81 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 Q3C1V9 767 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ANKRD22Q5VYY1 191 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 TLDC1Q6P9B6 456 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 VSIG10LQ86VR7 867 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 EID3Q8N140 333 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 LZTR1Q8N653 840 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ACTRT2Q8TDY3 377 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 CLPTM1LQ96KA5 538 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ZCWPW1Q9H0M4 648 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 MPP6Q9NZW5 540 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 WASF2Q9Y6W5 498 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 CCDC154A6NI56 674 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 CABYRO75952 493 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 WDR47O94967 919 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 COL6A2P12110 1019 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 NEK3P51956 506 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 TRAF2Q12933 501 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 C15orf59Q2T9L4 293 aaPredicted RBP8.92□□□□□ -0.98
PCDH9-202ENST00000377865 CYP2R1Q6VVX0 501 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 CCDC81Q6ZN84 652 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 NAT8LQ8N9F0 302 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 PABPC5Q96DU9 382 aaKnown RBP8.92□□□□□ -0.98
PCDH9-202ENST00000377865 FAXDC2Q96IV6 333 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 RCOR3Q9P2K3 495 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms