RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 GREM1O60565 184 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 RTN3O95197 1032 aaPredicted RBP12.78□□□□□ -0.36
VRK3-202ENST00000377011 KCNJ1P48048 391 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 SLC7A9P82251 487 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 PFKPQ01813 784 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 ZNF268Q14587 947 aaPredicted RBP12.78□□□□□ -0.36
VRK3-202ENST00000377011 RAB41Q5JT25 222 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 SNX30Q5VWJ9 437 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 PMF1Q6P1K2 205 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 DENND1BQ6P3S1 775 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 SFTPA1Q8IWL2 248 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 CLEC4CQ8WTT0 213 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 EZH1Q92800 747 aaPredicted RBP12.78□□□□□ -0.36
VRK3-202ENST00000377011 SGSM3Q96HU1 749 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 TRPV5Q9NQA5 729 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 SCML2Q9UQR0 700 aa12.78□□□□□ -0.36
VRK3-202ENST00000377011 IRF1P10914 325 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 MBL2P11226 248 aaPredicted RBP12.77□□□□□ -0.36
VRK3-202ENST00000377011 VDRP11473 427 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 RRM1P23921 792 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 SLC8A1P32418 973 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 CTHP32929 405 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 PRKCQQ04759 706 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 STAT4Q14765 748 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 PON2Q15165 354 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 SNCBQ16143 134 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 EML3Q32P44 896 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 LRRC38Q5VT99 294 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 PLEKHA7Q6IQ23 1121 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 PKN3Q6P5Z2 889 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 DRICH1Q6PGQ1 229 aaPredicted RBP12.77□□□□□ -0.36
VRK3-202ENST00000377011 Q6ZS52 159 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 EXOC3L1Q86VI1 746 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 PARP9Q8IXQ6 854 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 GBP7Q8N8V2 638 aaPredicted RBP12.77□□□□□ -0.36
VRK3-202ENST00000377011 DTWD2Q8NBA8 298 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 C1orf54Q8WWF1 131 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 FAM3CQ92520 227 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 E2F7Q96AV8 911 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 CCDC77Q9BR77 488 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 ULBP1Q9BZM6 244 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 PPCSQ9HAB8 311 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 CFAP97Q9P2B7 532 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 ANAPC5Q9UJX4 755 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.77□□□□□ -0.36
VRK3-202ENST00000377011 SLC12A4Q9UP95 1085 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 HCN4Q9Y3Q4 1203 aa12.77□□□□□ -0.36
VRK3-202ENST00000377011 CFAP73A6NFT4 308 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 GALR2O43603 387 aaPredicted RBP12.76□□□□□ -0.37
VRK3-202ENST00000377011 TLR5O60602 858 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 PTPN7P35236 360 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 TKTL1P51854 596 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 KPNA1P52294 538 aaPredicted RBP12.76□□□□□ -0.37
VRK3-202ENST00000377011 NOMO3P69849 1222 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 NR1H3Q13133 447 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 RUNX3Q13761 415 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 HECTD3Q5T447 861 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 LCLAT1Q6UWP7 414 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 CPNE8Q86YQ8 564 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 LRRC34Q8IZ02 419 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 SLC35F5Q8WV83 523 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 OSCP1Q8WVF1 389 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 ARHGEF2Q92974 986 aaKnown RBP12.76□□□□□ -0.37
VRK3-202ENST00000377011 RBM41Q96IZ5 413 aaKnown RBP12.76□□□□□ -0.37
VRK3-202ENST00000377011 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.76□□□□□ -0.37
VRK3-202ENST00000377011 DUS2Q9NX74 493 aaKnown RBP12.76□□□□□ -0.37
VRK3-202ENST00000377011 SOBPA7XYQ1 873 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 M0QYV0 167 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 CDH16O75309 829 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 LSM8O95777 96 aaKnown RBP12.76□□□□□ -0.37
VRK3-202ENST00000377011 CHRNB1P11230 501 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 GJA4P35212 333 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 ITGA8P53708 1063 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 COPS2P61201 443 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 NHLH1Q02575 133 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 ADIGQ0VDE8 80 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 PREPLQ4J6C6 727 aaPredicted RBP12.76□□□□□ -0.37
VRK3-202ENST00000377011 WLSQ5T9L3 541 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 TSSK4Q6SA08 328 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 CCDC25Q86WR0 208 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 C12orf40Q86WS4 652 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 WDTC1Q8N5D0 677 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 CSGALNACT1Q8TDX6 532 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 OVCA2Q8WZ82 227 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 PRMT1Q99873 361 aaKnown RBP12.76□□□□□ -0.37
VRK3-202ENST00000377011 KLF16Q9BXK1 252 aaPredicted RBP12.76□□□□□ -0.37
VRK3-202ENST00000377011 ECT2Q9H8V3 914 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 PNPLA8Q9NP80 782 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 PARVAQ9NVD7 372 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 ADAM22Q9P0K1 906 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 IP6K2Q9UHH9 426 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 GPR179Q6PRD1 2367 aa12.76□□□□□ -0.37
VRK3-202ENST00000377011 SMIM23A6NLE4 172 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 YJEFN3A6XGL0 299 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 E7ENQ6 273 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 XPO1O14980 1071 aaKnown RBP12.75□□□□□ -0.37
VRK3-202ENST00000377011 TRIM24O15164 1050 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 LCP1P13796 627 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 ADCY8P40145 1251 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 BCAT1P54687 386 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms