RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 MRPS21P82921 87 aaKnown RBP11.68□□□□□ -0.54
HSPG2-202ENST00000374676 GEN1Q17RS7 908 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 PLEKHG6Q3KR16 790 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 RFX8Q6ZV50 586 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 ADIPOR2Q86V24 386 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 VSIG1Q86XK7 387 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 SYCE1Q8N0S2 351 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 AHI1Q8N157 1196 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 RTL3Q8N8U3 475 aaKnown RBP11.68□□□□□ -0.54
HSPG2-202ENST00000374676 KCTD6Q8NC69 237 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 TSC1Q92574 1164 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 ALG14Q96F25 216 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 IER2Q9BTL4 223 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 GOLPH3Q9H4A6 298 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 ABCB8Q9NUT2 735 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 ELOVL2Q9NXB9 296 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 DDX56Q9NY93 547 aaKnown RBP11.68□□□□□ -0.54
HSPG2-202ENST00000374676 DLGAP2Q9P1A6 1054 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 INTS6Q9UL03 887 aaKnown RBP11.68□□□□□ -0.54
HSPG2-202ENST00000374676 HYOU1Q9Y4L1 999 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 OR51B4Q9Y5P0 310 aa11.68□□□□□ -0.54
HSPG2-202ENST00000374676 PRR33A8MZF0 331 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 ZNF487B1APH4 448 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 CHURC1-FNTBB4DL54 471 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 NPC1O15118 1278 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 DAPK3O43293 454 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 PI15O43692 258 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 PALMO75781 387 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 RHOCP08134 193 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 HNRNPLP14866 589 aaKnown RBP eCLIP11.67□□□□□ -0.54
HSPG2-202ENST00000374676 ERCC2P18074 760 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 KDELR1P24390 212 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 KIR2DL1P43626 348 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-202ENST00000374676 YBEYP58557 167 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-202ENST00000374676 DPYSQ14117 519 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 DPYSL3Q14195 570 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 KRT81Q14533 505 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 HSF5Q4G112 596 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-202ENST00000374676 PITRM1Q5JRX3 1037 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 TMEM31Q5JXX7 168 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 TMEM215Q68D42 235 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 MBLAC2Q68D91 279 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 TFAP2DQ7Z6R9 452 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 NT5DC3Q86UY8 548 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 SFTPA1Q8IWL2 248 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 UMODL1-AS1Q8N2C9 162 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 USP33Q8TEY7 942 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 UCMAQ8WVF2 138 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 FAF2Q96CS3 445 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 CSPG4P5Q96PW8 444 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 ZNF670Q9BS34 389 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 FEM1AQ9BSK4 669 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 MAGEH1Q9H213 219 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 CHRDQ9H2X0 955 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 PRDM16Q9HAZ2 1276 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 LZTFL1Q9NQ48 299 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 RBM12Q9NTZ6 932 aaKnown RBP11.67□□□□□ -0.54
HSPG2-202ENST00000374676 NDFIP2Q9NV92 336 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 AMFRQ9UKV5 643 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 HCN2Q9UL51 889 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
HSPG2-202ENST00000374676 CACNA1HO95180 2353 aa11.67□□□□□ -0.54
HSPG2-202ENST00000374676 CXorf51AA0A1B0GTR3 108 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 ATG13O75143 517 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 RNF40O75150 1001 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 ASLP04424 464 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 ATP5BP06576 529 aaKnown RBP11.66□□□□□ -0.54
HSPG2-202ENST00000374676 CD48P09326 243 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 POLR2EP19388 210 aaKnown RBP11.66□□□□□ -0.54
HSPG2-202ENST00000374676 CTNNA2P26232 953 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 MZF1P28698 734 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-202ENST00000374676 CTNNA1P35221 906 aaKnown RBP11.66□□□□□ -0.54
HSPG2-202ENST00000374676 GJC1P36383 396 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 ETFBP38117 255 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 CSKP41240 450 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 PEX5P50542 639 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-202ENST00000374676 GNA12Q03113 381 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 SULT2A1Q06520 285 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 FUT11Q495W5 492 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 EMC10Q5UCC4 262 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 RNF219Q5W0B1 726 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-202ENST00000374676 PEX26Q7Z412 305 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 REXO1L1PQ8IX06 675 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 KATNAL2Q8IYT4 538 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 APCDD1Q8J025 514 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 LZTR1Q8N653 840 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 KDM1BQ8NB78 822 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 OR52K2Q8NGK3 314 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 RAPGEF5Q92565 580 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 KLC2Q9H0B6 622 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 THAP10Q9P2Z0 257 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-202ENST00000374676 DNAI1Q9UI46 699 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 PCDHA3Q9Y5H8 950 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 CAPN6Q9Y6Q1 641 aa11.66□□□□□ -0.54
HSPG2-202ENST00000374676 LRRD1A4D1F6 860 aa11.65□□□□□ -0.54
HSPG2-202ENST00000374676 FAM86C2PA6NEL3 165 aa11.65□□□□□ -0.54
HSPG2-202ENST00000374676 C3orf70A6NLC5 250 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms