RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 LNPEPQ9UIQ6 1025 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 FCHO1O14526 889 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 ATP9BO43861 1147 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 SNNO75324 88 aaPredicted RBP19.16■□□□□ 0.66
USP49-202ENST00000373010 TPH1P17752 444 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 PRKCZQ05513 592 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 STX3Q13277 289 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 ACCSLQ4AC99 568 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 KYAT3Q6YP21 454 aaKnown RBP19.16■□□□□ 0.66
USP49-202ENST00000373010 CCDC91Q7Z6B0 441 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 ACMSDQ8TDX5 336 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 AZIN2Q96A70 460 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 ATXN7L3BQ96GX2 97 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 MIPEPQ99797 713 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 ARMCX1Q9P291 453 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 TXNDC16Q9P2K2 825 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 TTC3P53804 2025 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 EZRP15311 586 aaKnown RBP19.16■□□□□ 0.66
USP49-202ENST00000373010 SERPINB6P35237 376 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 DCLRE1AQ6PJP8 1040 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 ARHGAP36Q6ZRI8 547 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 NSL1Q96IY1 281 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 AGAP2Q99490 1192 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 NMUR2Q9GZQ4 415 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 BRD8Q9H0E9 1235 aa19.16■□□□□ 0.66
USP49-202ENST00000373010 COL4A4P53420 1690 aaPredicted RBP19.15■□□□□ 0.66
USP49-202ENST00000373010 ARHGAP42A6NI28 874 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 GLRA3O75311 464 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 KCNA4P22459 653 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 CCND1P24385 295 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 GP5P40197 560 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 ABCG1P45844 678 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 CMC1Q7Z7K0 106 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.15■□□□□ 0.66
USP49-202ENST00000373010 ZSCAN18Q8TBC5 510 aaPredicted RBP19.15■□□□□ 0.66
USP49-202ENST00000373010 MFSD3Q96ES6 412 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 KCNK4Q9NYG8 393 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 TRHDEQ9UKU6 1024 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.15■□□□□ 0.66
USP49-202ENST00000373010 ZCWPW2A0A1B0GU75 182 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 MTSS1O43312 755 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 MSI1O43347 362 aaKnown RBP19.15■□□□□ 0.66
USP49-202ENST00000373010 PLIN3O60664 434 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 LYPLA1O75608 230 aaPredicted RBP19.15■□□□□ 0.66
USP49-202ENST00000373010 PRKCGP05129 697 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 OR4Q2P0C623 313 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 ANKRD20A4Q4UJ75 823 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 ITPRIPL1Q6GPH6 555 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 OTOP3Q7RTS5 596 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 TMEM135Q86UB9 458 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 CRLF3Q8IUI8 442 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 PPP1R14CQ8TAE6 165 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 RAB3IL1Q8TBN0 382 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 TEKT5Q96M29 485 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 CPNE1Q99829 537 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 SFMBT1Q9UHJ3 866 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 NUDT5Q9UKK9 219 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 DSEQ9UL01 958 aa19.15■□□□□ 0.66
USP49-202ENST00000373010 HBS1LQ9Y450 684 aaKnown RBP19.15■□□□□ 0.66
USP49-202ENST00000373010 DFFAO00273 331 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 ITM2AO43736 263 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 B4GALT3O60512 393 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 IGLV3-25P01717 112 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 TYK2P29597 1187 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 AQP5P55064 265 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 CAP1Q01518 475 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 MBLAC2Q68D91 279 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 STRA8Q7Z7C7 330 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 DCLK2Q8N568 766 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 CNTD1Q8N815 330 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 DPF3Q92784 378 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 CHRAC1Q9NRG0 131 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 ZNF358Q9NW07 568 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 NEU3Q9UQ49 428 aa19.14■□□□□ 0.66
USP49-202ENST00000373010 CA12O43570 354 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 FGF3P11487 239 aaPredicted RBP19.14■□□□□ 0.65
USP49-202ENST00000373010 SLC5A3P53794 718 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 TSPY1Q01534 308 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 SREBF2Q12772 1141 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 STXBP5Q5T5C0 1151 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 GRTP1Q5TC63 336 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 THEM5Q8N1Q8 247 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 CADM1Q9BY67 442 aaKnown RBP19.14■□□□□ 0.65
USP49-202ENST00000373010 OSBPL2Q9H1P3 480 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 TLE6Q9H808 572 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 SNX15Q9NRS6 342 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 TMEM216Q9P0N5 145 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 DCDC2Q9UHG0 476 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 NOD1Q9Y239 953 aa19.14■□□□□ 0.65
USP49-202ENST00000373010 PATJQ8NI35 1801 aa19.13■□□□□ 0.65
USP49-202ENST00000373010 CCDC78A2IDD5 438 aa19.13■□□□□ 0.65
USP49-202ENST00000373010 ERI2A8K979 691 aaKnown RBP19.13■□□□□ 0.65
USP49-202ENST00000373010 ZNF189O75820 626 aaPredicted RBP19.13■□□□□ 0.65
USP49-202ENST00000373010 USP1O94782 785 aa19.13■□□□□ 0.65
USP49-202ENST00000373010 GM2AP17900 193 aa19.13■□□□□ 0.65
USP49-202ENST00000373010 GRIK1P39086 918 aa19.13■□□□□ 0.65
USP49-202ENST00000373010 ZNF135P52742 658 aaPredicted RBP19.13■□□□□ 0.65
USP49-202ENST00000373010 NKX3-2P78367 333 aa19.13■□□□□ 0.65
USP49-202ENST00000373010 PCLAFQ15004 111 aa19.13■□□□□ 0.65
USP49-202ENST00000373010 HSP90AA5PQ58FG0 334 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms