RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 TCTN1Q2MV58 587 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 ZNF449Q6P9G9 518 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 NDUFAF2Q8N183 169 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 NUP93Q8N1F7 819 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 LZTR1Q8N653 840 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 DNAAF3Q8N9W5 541 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 ZNF398Q8TD17 642 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 C10orf82Q8WW14 230 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 DPF3Q92784 378 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 CELF6Q96J87 481 aaKnown RBP13.71□□□□□ -0.22
CSTF2-201ENST00000372972 TSSK1BQ9BXA7 367 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 ECT2Q9H8V3 914 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 LRRC40Q9H9A6 602 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 NMUR1Q9HB89 426 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 CASS4Q9NQ75 786 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 TMEM161AQ9NX61 479 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 DNAJB4Q9UDY4 337 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 VANGL2Q9ULK5 521 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 PRG3Q9Y2Y8 225 aaPredicted RBP13.71□□□□□ -0.22
CSTF2-201ENST00000372972 RPS6KL1Q9Y6S9 549 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 A0A1W2PQH9 124 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 ARHGAP42A6NI28 874 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 KLF11O14901 512 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 SYN3O14994 580 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 FGF10O15520 208 aaPredicted RBP13.7□□□□□ -0.22
CSTF2-201ENST00000372972 NFKB1P19838 968 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 HOXC13P31276 330 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
CSTF2-201ENST00000372972 PRPSAP1Q14558 356 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 PACS1Q6VY07 963 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 SLC39A5Q6ZMH5 540 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 MON1AQ86VX9 555 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 TRIM42Q8IWZ5 723 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 ZSCAN18Q8TBC5 510 aaPredicted RBP13.7□□□□□ -0.22
CSTF2-201ENST00000372972 ACMSDQ8TDX5 336 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 SEPT8Q92599 483 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 FCRL2Q96LA5 508 aaPredicted RBP13.7□□□□□ -0.22
CSTF2-201ENST00000372972 C8orf48Q96LL4 319 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 TSGA13Q96PP4 275 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 LRRC37BQ96QE4 947 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 FBXO44Q9H4M3 255 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 CATSPERBQ9H7T0 1116 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 NPHS2Q9NP85 383 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 KLC4Q9NSK0 619 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 NEU3Q9UQ49 428 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 SCML2Q9UQR0 700 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
CSTF2-201ENST00000372972 MAGEB16A2A368 324 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 PSMD3O43242 534 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 MSI1O43347 362 aaKnown RBP13.69□□□□□ -0.22
CSTF2-201ENST00000372972 USP12O75317 370 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 BGNP21810 368 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 HNRNPH1P31943 449 aaKnown RBP13.69□□□□□ -0.22
CSTF2-201ENST00000372972 NPY2RP49146 381 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 NCALDP61601 193 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 SLC20A2Q08357 652 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 OLIG2Q13516 323 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
CSTF2-201ENST00000372972 MANEALQ5VSG8 457 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 TMEM135Q86UB9 458 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 TBC1D31Q96DN5 1066 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 CERS2Q96G23 380 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 SCLYQ96I15 445 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 SERPINB11Q96P15 392 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 MLPHQ9BV36 600 aaPredicted RBP13.69□□□□□ -0.22
CSTF2-201ENST00000372972 ELAC1Q9H777 363 aaKnown RBP13.69□□□□□ -0.22
CSTF2-201ENST00000372972 PCMTD2Q9NV79 361 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 ZFATQ9P243 1243 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 CHKBQ9Y259 395 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 PCDHB5Q9Y5E4 795 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 PTPRDP23468 1912 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 MYO18AQ92614 2054 aaKnown RBP13.69□□□□□ -0.22
CSTF2-201ENST00000372972 KCNU1A8MYU2 1149 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 AP3B1O00203 1094 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 DFFAO00273 331 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 C2CD2LO14523 706 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 HGSO14964 777 aaPredicted RBP13.69□□□□□ -0.22
CSTF2-201ENST00000372972 TGDSO95455 350 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 IL1BP01584 269 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 SKIV2L2P42285 1042 aaKnown RBP13.69□□□□□ -0.22
CSTF2-201ENST00000372972 DDR2Q16832 855 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 CES3Q6UWW8 571 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 ANKRD33Q7Z3H0 272 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 ABI1Q8IZP0 508 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 ARHGAP18Q8N392 663 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 ANKLE1Q8NAG6 615 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 ARMC2Q8NEN0 867 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 FCRL3Q96P31 734 aaPredicted RBP13.69□□□□□ -0.22
CSTF2-201ENST00000372972 TRIM55Q9BYV6 548 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 MYLK2Q9H1R3 596 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 TXNDC16Q9P2K2 825 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 NUDT5Q9UKK9 219 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
CSTF2-201ENST00000372972 TET1Q8NFU7 2136 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 CACNG3O60359 315 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 USP1O94782 785 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 ERVK-10P10266 1014 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 CCNB1P14635 433 aa13.68□□□□□ -0.22
CSTF2-201ENST00000372972 MAGEA11P43364 429 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms