RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SNX10Q9Y5X0 201 aa13.58□□□□□ -0.23
RPF1-201ENST00000370654 PKD1L2Q7Z442 2459 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 TP53BP1Q12888 1972 aaPredicted RBP13.58□□□□□ -0.24
RPF1-201ENST00000370654 EDDM13A0A1B0GTR0 161 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 A0A1W2PR77 199 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 TARSL2A2RTX5 802 aaKnown RBP13.58□□□□□ -0.24
RPF1-201ENST00000370654 RNF103O00237 685 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 FOXN3O00409 490 aaPredicted RBP13.58□□□□□ -0.24
RPF1-201ENST00000370654 SRPRAP08240 638 aaKnown RBP13.58□□□□□ -0.24
RPF1-201ENST00000370654 DRD3P35462 400 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 CLCN1P35523 988 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 CLDN6P56747 220 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 PPP2CBP62714 309 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 PPP2CAP67775 309 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 TEAD4Q15561 434 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 PTPN20Q4JDL3 420 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 ARTNQ5T4W7 220 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 OLFML1Q6UWY5 402 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 SLC47A2Q86VL8 602 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 PROSER1Q86XN7 944 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 GATAD2AQ86YP4 633 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 KDM1BQ8NB78 822 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 PPP1R13BQ96KQ4 1090 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 CAAP1Q9H8G2 361 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 FAM204AQ9H8W3 233 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 TMPRSS4Q9NRS4 437 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 DDIT4Q9NX09 232 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 APEX2Q9UBZ4 518 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 ADAMTS1Q9UHI8 967 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 SARDHQ9UL12 918 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 APOBEC2Q9Y235 224 aaKnown RBP13.58□□□□□ -0.24
RPF1-201ENST00000370654 NCKAP1Q9Y2A7 1128 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 CEP83Q9Y592 693 aa13.58□□□□□ -0.24
RPF1-201ENST00000370654 DOCK9Q9BZ29 2069 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 TYW5A2RUC4 315 aaKnown RBP13.57□□□□□ -0.24
RPF1-201ENST00000370654 FAM149AA5PLN7 773 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 F5H5T6 163 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 FLRT2O43155 660 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 RDXP35241 583 aaKnown RBP13.57□□□□□ -0.24
RPF1-201ENST00000370654 ADPRHP54922 357 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 AUHQ13825 339 aaKnown RBP13.57□□□□□ -0.24
RPF1-201ENST00000370654 POM121L1PQ3SYA9 428 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 OR6B2Q6IFH4 312 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 GBP6Q6ZN66 633 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 TMPRSS7Q7RTY8 843 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 ATP6V0D2Q8N8Y2 350 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 ZNF557Q8N988 423 aaPredicted RBP13.57□□□□□ -0.24
RPF1-201ENST00000370654 OMDQ99983 421 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.57□□□□□ -0.24
RPF1-201ENST00000370654 DNAJC12Q9UKB3 198 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 VANGL2Q9ULK5 521 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 PCDHGC3Q9UN70 934 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 OR51B4Q9Y5P0 310 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 HS3ST4Q9Y661 456 aa13.57□□□□□ -0.24
RPF1-201ENST00000370654 ZFYVE26Q68DK2 2539 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 CELSR3Q9NYQ7 3312 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 A0A1B0GTQ1 180 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 VILLO15195 856 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 LAMA5O15230 3695 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 PCDHGA12O60330 932 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 RTN2O75298 545 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 CNTN5O94779 1100 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 IL1BP01584 269 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 GOT1P17174 413 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 CCT8P50990 548 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 PLK1P53350 603 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 RACK1P63244 317 aaKnown RBP13.56□□□□□ -0.24
RPF1-201ENST00000370654 CDK17Q00537 523 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 NME3Q13232 169 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 EXOC3L4Q17RC7 722 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 CCDC157Q569K6 752 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 HSP90AA4PQ58FG1 418 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 C19orf48Q6RUI8 117 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.56□□□□□ -0.24
RPF1-201ENST00000370654 ENOSF1Q7L5Y1 443 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 OR2T34Q8NGX1 318 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 OR14C36Q8NHC7 312 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 SCML1Q9UN30 329 aa13.56□□□□□ -0.24
RPF1-201ENST00000370654 FAM208BQ5VWN6 2430 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 RNASEH1O60930 286 aaKnown RBP13.55□□□□□ -0.24
RPF1-201ENST00000370654 PAGE1O75459 146 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 MOCS3O95396 460 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 ADCY5O95622 1261 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 MT-CO1P00395 513 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 C5AR1P21730 350 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 CCR1P32246 355 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 KCNMA1Q12791 1236 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 CAMK2BQ13554 666 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 ALFQ53S48 1182 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 C2CD6Q53TS8 623 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 MIIPQ5JXC2 388 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 RNF219Q5W0B1 726 aaPredicted RBP13.55□□□□□ -0.24
RPF1-201ENST00000370654 LRSAM1Q6UWE0 723 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 C11orf57Q6ZUT1 292 aaPredicted RBP13.55□□□□□ -0.24
RPF1-201ENST00000370654 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
RPF1-201ENST00000370654 ADAT2Q7Z6V5 191 aaKnown RBP13.55□□□□□ -0.24
RPF1-201ENST00000370654 CCDC117Q8IWD4 279 aaPredicted RBP13.55□□□□□ -0.24
RPF1-201ENST00000370654 ZNF683Q8IZ20 524 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 RNF34Q969K3 372 aa13.55□□□□□ -0.24
RPF1-201ENST00000370654 FAM131CQ96AQ9 280 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms