RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SPANXN2Q5MJ10 180 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 RINLQ6ZS11 566 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 B3GALNT2Q8NCR0 500 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 GSTCDQ8NEC7 633 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 GPRC5AQ8NFJ5 357 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 ITGB1BP2Q9UKP3 347 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 ADAM28Q9UKQ2 775 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 MGAT4DA6NG13 374 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 HDAC3O15379 428 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 CHI3L1P36222 383 aaPredicted RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 ST8SIA6P61647 398 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 SAMD7Q7Z3H4 446 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 C8orf59Q8N0T1 100 aaPredicted RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 GTF3C2Q8WUA4 911 aaPredicted RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 MARK4Q96L34 752 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 RSL24D1Q9UHA3 163 aaKnown RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 PRR5-ARHGAP8B1AHC4 643 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 MEIS2O14770 477 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 PIK3R1P27986 724 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 ST13P50502 369 aaKnown RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 RENBPP51606 427 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 ARHGAP8P85298 464 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 TRAF3Q13114 568 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 OR56A4Q8NGH8 313 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 METTL6Q8TCB7 284 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 DGCR14Q96DF8 476 aaKnown RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 RNF157Q96PX1 679 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 RIBC2Q9H4K1 309 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 MAN1C1Q9NR34 630 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 A0A087X1B8 175 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 UQCRBP14927 111 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 ALOX15P16050 662 aaPredicted RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 SLC16A1P53985 500 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 RPL7AP62424 266 aaKnown RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 DNAJC14Q6Y2X3 702 aaPredicted RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 DDX53Q86TM3 631 aaKnown RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 BTN2A2Q8WVV5 523 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 TBL1YQ9BQ87 522 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 LRRC4CQ9HCJ2 640 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 SCUBE2Q9NQ36 999 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 TAS2R13Q9NYV9 303 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 PSMB4P28070 264 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 ZNF143P52747 638 aaPredicted RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 HK2P52789 917 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 CDC16Q13042 620 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 CDH18Q13634 790 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 BLMHQ13867 455 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 UNC5AQ6ZN44 842 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 FAM228AQ86W67 206 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 EBNA1BP2Q99848 306 aaKnown RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 TMEM109Q9BVC6 243 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 SPATA16Q9BXB7 569 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 ATXN3LQ9H3M9 355 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 HACL1Q9UJ83 578 aa17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 ABT1Q9ULW3 272 aaKnown RBP17.44■□□□□ 0.38
PTP4A1-201ENST00000370651 ADCY6O43306 1168 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 MGRN1O60291 552 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 SNRPB2P08579 225 aaKnown RBP17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 VAV1P15498 845 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 FBXW4P57775 412 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 DMPKQ09013 629 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 EPS8Q12929 822 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 INAQ16352 499 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 PPP4R4Q6NUP7 873 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 OR52K1Q8NGK4 314 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 FBXO32Q969P5 355 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 MECRQ9BV79 373 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 IL22Q9GZX6 179 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 POLR1BQ9H9Y6 1135 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 RNF181Q9P0P0 153 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 DUSP12Q9UNI6 340 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 KRT87PA6NCN2 255 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 LACTBL1A8MY62 500 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 PSTKQ8IV42 348 aaKnown RBP17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 FBXO16Q8IX29 292 aaPredicted RBP17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 SPAG4Q9NPE6 437 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 PNPLA3Q9NST1 481 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 PRPF19Q9UMS4 504 aaKnown RBP17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 TNS2Q63HR2 1409 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 ARHGEF28Q8N1W1 1705 aaKnown RBP17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 MAP3K13O43283 966 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 TSC22D2O75157 780 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 KATNA1O75449 491 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 NOL4O94818 638 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 GUCA1CO95843 209 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 ASS1P00966 412 aaKnown RBP17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 SERPINF2P08697 491 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 YY1P25490 414 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 GABRB2P47870 512 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 NUMBP49757 651 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 KBTBD2Q8IY47 623 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 SPPL2AQ8TCT8 520 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 TRIM63Q969Q1 353 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 ATXN10Q9UBB4 475 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 PRKAG2Q9UGJ0 569 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 SH3BP1Q9Y3L3 701 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 PRRG1O14668 218 aa17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 TRUB2O95900 331 aaKnown RBP17.43■□□□□ 0.38
PTP4A1-201ENST00000370651 YBX3P16989 372 aaKnown RBP eCLIP17.43■□□□□ 0.381e-8■■■□□ 15.2
PTP4A1-201ENST00000370651 EFEMP1Q12805 493 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms