RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 IGDCC3Q8IVU1 814 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ADGRF2Q8IZF7 708 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ABI1Q8IZP0 508 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 HASPINQ8TF76 798 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 POMKQ9H5K3 350 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 GNEQ9Y223 722 aaKnown RBP14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ATICP31939 592 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 PSEN1P49768 467 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 RALGDSQ12967 914 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 CNPY1Q3B7I2 92 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 AAGABQ6PD74 315 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 LINC00523Q86TU6 105 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.17□□□□□ -0.14
COL6A1-201ENST00000361866 P2RY11Q96G91 374 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 CIB1Q99828 191 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 RRN3Q9NYV6 651 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 XPR1Q9UBH6 696 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 EGFL7Q9UHF1 273 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 DSEQ9UL01 958 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 KIF13AQ9H1H9 1805 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 SLCO1B7G3V0H7 640 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 PLSCR1O15162 318 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 HMOX2P30519 316 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 CRHR1P34998 444 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 PSME3P61289 254 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 USP46P62068 366 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 CDH17Q12864 832 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 MOGSQ13724 837 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 TMEM132BQ14DG7 1078 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 PRKD1Q15139 912 aaPredicted RBP14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ADRM1Q16186 407 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 CYP51A1Q16850 503 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 C1orf220Q5T0J3 134 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 NOTUMQ6P988 496 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 TREML1Q86YW5 311 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 MPP5Q8N3R9 675 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 MIPEPQ99797 713 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ELOVL4Q9GZR5 314 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 CDHR5Q9HBB8 845 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 DDX28Q9NUL7 540 aaKnown RBP14.17□□□□□ -0.14
COL6A1-201ENST00000361866 COPG2Q9UBF2 871 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 BIRC5O15392 142 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 DHX15O43143 795 aaKnown RBP14.16□□□□□ -0.14
COL6A1-201ENST00000361866 MAP3K13O43283 966 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ITM2AO43736 263 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ANXA9O76027 345 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 FASP25445 335 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 LRPAP1P30533 357 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ABL2P42684 1182 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 RPS6KA3P51812 740 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 CSE1LP55060 971 aaKnown RBP14.16□□□□□ -0.14
COL6A1-201ENST00000361866 GTF2H3Q13889 308 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 CERCAMQ5T4B2 595 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 CHSY1Q86X52 802 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 MICU2Q8IYU8 434 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ZNF781Q8N8C0 355 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 REPS2Q8NFH8 660 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 FIZ1Q96SL8 496 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 TMEM134Q9H6X4 195 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 SETD4Q9NVD3 440 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 CD274Q9NZQ7 290 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 LNPEPQ9UIQ6 1025 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 CRYL1Q9Y2S2 319 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 PSMD12O00232 456 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-201ENST00000361866 TYROBPO43914 113 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ATP8B3O60423 1300 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 METTL18O95568 372 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 MPOP05164 745 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 YBX3P16989 372 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL6A1-201ENST00000361866 CHRM3P20309 590 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ATP6V1B2P21281 511 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 CD151P48509 253 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ZIK1Q3SY52 487 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ABHD15Q6UXT9 468 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 THEM5Q8N1Q8 247 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 MIER2Q8N344 545 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 TMCO5AQ8N6Q1 288 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ZNF555Q8NEP9 628 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 CALML6Q8TD86 181 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 CLEC4DQ8WXI8 215 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 MFSD3Q96ES6 412 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ASB7Q9H672 318 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 KIF17Q9P2E2 1029 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 PSMD13Q9UNM6 376 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 ZNF541Q9H0D2 1346 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 PTGES3LE9PB15 166 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 B3GAT3O94766 335 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 AMHP03971 560 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 MYL4P12829 197 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 HSDL1Q3SXM5 330 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 SPANXN3Q5MJ09 141 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 SPOUT1Q5T280 376 aaKnown RBP14.16□□□□□ -0.14
COL6A1-201ENST00000361866 TFAP2DQ7Z6R9 452 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 KIAA2013Q8IYS2 634 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 PYROXD2Q8N2H3 581 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 NAT14Q8WUY8 206 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 PANX3Q96QZ0 392 aa14.16□□□□□ -0.14
COL6A1-201ENST00000361866 C9JVG2 144 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 AP3B1O00203 1094 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms