RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 TBC1D3KA0A087X1G2 549 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 TBC1D3FA6NER0 549 aaPredicted RBP21.81■■□□□ 1.08
CD47-202ENST00000361309 TBC1D3LB9A6J9 549 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 TLR4O00206 839 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 PMM2O15305 246 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 IL1BP01584 269 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 TBC1D3HP0C7X1 549 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 CDK4P11802 303 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 TACR2P21452 398 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 MZF1P28698 734 aaPredicted RBP21.81■■□□□ 1.08
CD47-202ENST00000361309 ARRB1P49407 418 aaPredicted RBP21.81■■□□□ 1.08
CD47-202ENST00000361309 ACADVLP49748 655 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 NXPH1P58417 271 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 PPP2CBP62714 309 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 PPP2CAP67775 309 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 TBC1D3GQ6DHY5 549 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 TBC1D3CQ6IPX1 549 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 RRAGAQ7L523 313 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 CHSY1Q86X52 802 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 TBC1D3Q8IZP1 549 aaPredicted RBP21.81■■□□□ 1.08
CD47-202ENST00000361309 LMO3Q8TAP4 145 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 TJP2Q9UDY2 1190 aa21.81■■□□□ 1.08
CD47-202ENST00000361309 CAPN9O14815 690 aa21.8■■□□□ 1.08
CD47-202ENST00000361309 SART1O43290 800 aaKnown RBP21.8■■□□□ 1.08
CD47-202ENST00000361309 APOEP02649 317 aa21.8■■□□□ 1.08
CD47-202ENST00000361309 VAV1P15498 845 aa21.8■■□□□ 1.08
CD47-202ENST00000361309 ITPKBP27987 946 aa21.8■■□□□ 1.08
CD47-202ENST00000361309 GPD2P43304 727 aa21.8■■□□□ 1.08
CD47-202ENST00000361309 RPL34P49207 117 aaKnown RBP21.8■■□□□ 1.08
CD47-202ENST00000361309 TARDBPQ13148 414 aaKnown RBP eCLIP21.8■■□□□ 1.08
CD47-202ENST00000361309 SLC45A4Q5BKX6 768 aa21.8■■□□□ 1.08
CD47-202ENST00000361309 ZC3H12AQ5D1E8 599 aaKnown RBP21.8■■□□□ 1.08
CD47-202ENST00000361309 HES3Q5TGS1 186 aa21.8■■□□□ 1.08
CD47-202ENST00000361309 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.8■■□□□ 1.08
CD47-202ENST00000361309 ARHGEF19Q8IW93 802 aa21.8■■□□□ 1.08
CD47-202ENST00000361309 TSC1Q92574 1164 aa21.8■■□□□ 1.08
CD47-202ENST00000361309 TPX2Q9ULW0 747 aaKnown RBP21.8■■□□□ 1.08
CD47-202ENST00000361309 SETXQ7Z333 2677 aaKnown RBP21.8■■□□□ 1.08
CD47-202ENST00000361309 LATO43561 262 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 TLX3O43711 291 aaPredicted RBP21.79■■□□□ 1.08
CD47-202ENST00000361309 SMC2O95347 1197 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 DRD3P35462 400 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 NNMTP40261 264 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 METAP1P53582 386 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 NUCB2P80303 420 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 SEMG2Q02383 582 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 ELAVL3Q14576 367 aaKnown RBP21.79■■□□□ 1.08
CD47-202ENST00000361309 CCDC40Q4G0X9 1142 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 SPATA20Q8TB22 786 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 SMARCE1Q969G3 411 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 BTN2A3PQ96KV6 586 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 ERVMER34-1Q9H9K5 563 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 AK5Q9Y6K8 562 aa21.79■■□□□ 1.08
CD47-202ENST00000361309 PDGFRAP16234 1089 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 ACADSBP45954 432 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 RXRGP48443 463 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 CETN1Q12798 172 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 NAPEPLDQ6IQ20 393 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 DENND1BQ6P3S1 775 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 FBXL19Q6PCT2 694 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 BEND5Q7L4P6 421 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 CIR1Q86X95 450 aaPredicted RBP21.78■■□□□ 1.08
CD47-202ENST00000361309 SPATS2Q86XZ4 545 aaKnown RBP21.78■■□□□ 1.08
CD47-202ENST00000361309 OXR1Q8N573 874 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 MFSD2AQ8NA29 543 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 CEP63Q96MT8 703 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 UBL7Q96S82 380 aaPredicted RBP21.78■■□□□ 1.08
CD47-202ENST00000361309 ARHGAP20Q9P2F6 1191 aa21.78■■□□□ 1.08
CD47-202ENST00000361309 F5H5T6 163 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 PSMA7O14818 248 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 TRUB2O95900 331 aaKnown RBP21.77■■□□□ 1.08
CD47-202ENST00000361309 MAT2AP31153 395 aaKnown RBP21.77■■□□□ 1.08
CD47-202ENST00000361309 EIF2S3P41091 472 aaKnown RBP21.77■■□□□ 1.08
CD47-202ENST00000361309 PITX1P78337 314 aaPredicted RBP21.77■■□□□ 1.08
CD47-202ENST00000361309 GCNT1Q02742 428 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 SLC12A1Q13621 1099 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 SFMBT2Q5VUG0 894 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 ISM2Q6H9L7 571 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 LRRC69Q6ZNQ3 347 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 KANSL1Q7Z3B3 1105 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 PRPF39Q86UA1 669 aaKnown RBP21.77■■□□□ 1.08
CD47-202ENST00000361309 FRS2Q8WU20 508 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 KREMEN1Q96MU8 473 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 SPAG5Q96R06 1193 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 TRIM62Q9BVG3 475 aa21.77■■□□□ 1.08
CD47-202ENST00000361309 P4HA2O15460 535 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 RTN2O75298 545 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 IGLV3-25P01717 112 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 CD44P16070 742 aaKnown RBP21.76■■□□□ 1.07
CD47-202ENST00000361309 SULT2A1Q06520 285 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 STIM1Q13586 685 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 CCAR2Q8N163 923 aaKnown RBP21.76■■□□□ 1.07
CD47-202ENST00000361309 ATP6V0D2Q8N8Y2 350 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 EHBP1Q8NDI1 1231 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 FAM131CQ96AQ9 280 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 DHTKD1Q96HY7 919 aaPredicted RBP21.76■■□□□ 1.07
CD47-202ENST00000361309 SLC4A5Q9BY07 1137 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 GTPBP4Q9BZE4 634 aaKnown RBP21.76■■□□□ 1.07
CD47-202ENST00000361309 NRSN2Q9GZP1 204 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 POPDC2Q9HBU9 364 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms