RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 IQCMA0A1B0GVH7 501 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 DCXO43602 365 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 CCDC167Q9P0B6 97 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 MFHAS1Q9Y4C4 1052 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 CHD4Q14839 1912 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF879B4DU55 563 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 AP3D1O14617 1153 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 C6orf222P0C671 652 aaPredicted RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 RRM1P23921 792 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 MCAMP43121 646 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 SWT1Q5T5J6 900 aaKnown RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 HIPK1Q86Z02 1210 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ADHFE1Q8IWW8 467 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 SAMD3Q8N6K7 520 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 TBC1D13Q9NVG8 400 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 NPTXRO95502 500 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 GSTM5P46439 218 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 TCP10LQ8TDR4 215 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF75CPQ92670 426 aaPredicted RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 TEKT5Q96M29 485 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 FAM25EA8MYX2 175 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 SASH3O75995 380 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 OGNP20774 298 aaKnown RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 TLX1P31314 330 aaPredicted RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 TUBA1BP68363 451 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 INTS11Q5TA45 600 aaKnown RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 TUBA1AQ71U36 451 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 PIK3C3Q8NEB9 887 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 NIF3L1Q9GZT8 377 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ADPRHL2Q9NX46 363 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 ASAP1Q9ULH1 1129 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 MRPS7Q9Y2R9 242 aaKnown RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 A0A1W2PQ72 361 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 SGTAO43765 313 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 URODP06132 367 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 CXCR2P25025 360 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 FAR1Q8WVX9 515 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 NUDT12Q9BQG2 462 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 TMEM47Q9BQJ4 181 aa13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 RAVER2Q9HCJ3 691 aaKnown RBP13.44□□□□□ -0.26
SRGAP3-201ENST00000360413 CETPP11597 493 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 FAUP35544 74 aaKnown RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 NR2C2P49116 596 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 RBBP4Q09028 425 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 FGD3Q5JSP0 725 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 TTC7BQ86TV6 843 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 KANSL3Q9P2N6 904 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 CDH9Q9ULB4 789 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ANKRD6Q9Y2G4 727 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 MMP10P09238 476 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 CYP4F2P78329 520 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 CYP4F3Q08477 520 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 IL18R1Q13478 541 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 NR6A1Q15406 480 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 NFE2Q16621 373 aaPredicted RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 INO80DQ53TQ3 878 aaPredicted RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 GRPEL2Q8TAA5 225 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 PANX3Q96QZ0 392 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 PRDM16Q9HAZ2 1276 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 GGA2Q9UJY4 613 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 PMPCBO75439 489 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ANPEPP15144 967 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 FOLH1Q04609 750 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ALX1Q15699 326 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ATF7IP2Q5U623 682 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 PYHIN1Q6K0P9 492 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 MB21D2Q8IYB1 491 aaPredicted RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 STK40Q8N2I9 435 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 TMEM159Q96B96 161 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ORAI2Q96SN7 254 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 TRPC4Q9UBN4 977 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 CAPN6Q9Y6Q1 641 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 TET3O43151 1660 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ACOT2P49753 483 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 SEMA4DQ92854 862 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 PNPLA3Q9NST1 481 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 UGGT1Q9NYU2 1555 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 IRGMA1A4Y4 181 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 URADA6NGE7 173 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 POMCP01189 267 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 CKBP12277 381 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 OR1G1P47890 313 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 GCLCP48506 637 aaPredicted RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 LHX1P48742 406 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 PKNOX1P55347 436 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 BICRALQ6AI39 1079 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 TMC3Q7Z5M5 1100 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF276Q8N554 614 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 EMC1Q8N766 993 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 RFT1Q96AA3 541 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 CLK4Q9HAZ1 481 aaKnown RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 CHMP1AQ9HD42 196 aaPredicted RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ATXN2Q99700 1313 aaKnown RBP13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 SNAP91O60641 907 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 PLA2G6O60733 806 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 ATP6V1G1O75348 118 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 TNNI3P19429 210 aa13.43□□□□□ -0.26
SRGAP3-201ENST00000360413 CCNCP24863 283 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms