RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 EPHX2P34913 555 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 FNDC3BQ53EP0 1204 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 DSELQ8IZU8 1212 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 TPD52L3Q96J77 140 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 FTHL17Q9BXU8 183 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 POPDC2Q9HBU9 364 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 ZNHIT3Q15649 155 aaPredicted RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 PAN2Q504Q3 1202 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 TYW3Q6IPR3 259 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 ACOT1Q86TX2 421 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 UBP1Q9NZI7 540 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 KLK14Q9P0G3 267 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 SPATA31A1Q5TZJ5 1347 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 IRGMA1A4Y4 181 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 PHGDHO43175 533 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 NPTX2P47972 431 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 IL2P60568 153 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 ARMC12Q5T9G4 340 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 CHPFQ8IZ52 775 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 CAVIN3Q969G5 261 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 KCNQ5Q9NR82 932 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 TMEM39AQ9NV64 488 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 ABRAQ8N0Z2 381 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 PRMT6Q96LA8 375 aaPredicted RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 SMAD5Q99717 465 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 ING3Q9NXR8 418 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 PQBP1O60828 265 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 BTG3Q14201 252 aaPredicted RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 KLHL35Q6PF15 583 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 NKAPQ8N5F7 415 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 JMJD4Q9H9V9 463 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 CYP4F12Q9HCS2 524 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 FBXO10Q9UK96 956 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 ARHGDIBP52566 201 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 SNRPD1P62314 119 aaKnown RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 ZNF34Q8IZ26 560 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 CCDC33Q8N5R6 958 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 CENPIQ92674 756 aaPredicted RBP9.85□□□□□ -0.83
CUX1-203ENST00000360264 TBCDQ9BTW9 1192 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 BTBD7Q9P203 1132 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 INVSQ9Y283 1065 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 FAM126BQ8IXS8 530 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 UXS1Q8NBZ7 420 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 EXO5Q9H790 373 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 NUP205Q92621 2012 aa9.85□□□□□ -0.83
CUX1-203ENST00000360264 ZSCAN5CA6NGD5 496 aaPredicted RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 TTKP33981 857 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 KCNJ1P48048 391 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 LAMTOR4Q0VGL1 99 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 POU6F1Q14863 301 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 R3HCC1LQ7Z5L2 792 aaKnown RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 PALB2Q86YC2 1186 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 RXFP2Q8WXD0 754 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 MYDGFQ969H8 173 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 SH2D3AQ9BRG2 576 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 NRDE2Q9H7Z3 1164 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 A0A087WXM4 84 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 QSOX1O00391 747 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 KRT33AO76009 404 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 RAG1P15918 1043 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 FMR1Q06787 632 aaKnown RBP eCLIP9.84□□□□□ -0.83
CUX1-203ENST00000360264 TOMM20Q15388 145 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 PTAR1Q7Z6K3 402 aaPredicted RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 FBXO16Q8IX29 292 aaPredicted RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 OMDQ99983 421 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 CNPPD1Q9BV87 410 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ZNF214Q9UL59 606 aaPredicted RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 ZNF510Q9Y2H8 683 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 WEE1P30291 646 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 MMP13P45452 471 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 CXXC5Q7LFL8 322 aaKnown RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 NACC2Q96BF6 587 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 SPACA7Q96KW9 195 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 SLC38A2Q96QD8 506 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 SLC40A1Q9NP59 571 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 MARCH2Q9P0N8 246 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 NDUFAF1Q9Y375 327 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 OR10H1Q9Y4A9 318 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 CTSEP14091 401 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 RPL9P32969 192 aaKnown RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 PPM1AP35813 382 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 TTPAP49638 278 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 CCNDBP1O95273 360 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 GHRP10912 638 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 NQO1P15559 274 aaKnown RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 WASHC2DQ5SRD0 308 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ZNF621Q6ZSS3 439 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ZCCHC7Q8N3Z6 543 aaKnown RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 ATG4CQ96DT6 458 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ZNF304Q9HCX3 659 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 SLC25A12O75746 678 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 HLA-DQA2P01906 255 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ADH1AP07327 375 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 CSH1P0DML2 217 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 CSH2P0DML3 217 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 HTR1BP28222 390 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ERFP50548 548 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 TGFB2P61812 414 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 RGS1Q08116 209 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms