RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 RCN3Q96D15 328 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 CERS2Q96G23 380 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 CPB2Q96IY4 423 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 MARK4Q96L34 752 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 CXCL16Q9H2A7 254 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 ZNF696Q9H7X3 374 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 VRTNQ9H8Y1 702 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 DNAAF2Q9NVR5 837 aaKnown RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 GGA3Q9NZ52 723 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 HEMK1Q9Y5R4 338 aaPredicted RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 PSME4Q14997 1843 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 PARP14Q460N5 1801 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 PTPRFP10586 1907 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 MFSD11O43934 449 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 P4HA1P13674 534 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 NR2C2P49116 596 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 SOWAHAQ2M3V2 549 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 CCDC153Q494R4 210 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 RARS2Q5T160 578 aaKnown RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 CATSPERGQ6ZRH7 1159 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 TMEM110Q86TL2 294 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 AHI1Q8N157 1196 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 GRIN3AQ8TCU5 1115 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 FERMT1Q9BQL6 677 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 MRPL45Q9BRJ2 306 aaKnown RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 C11orf84Q9BUA3 381 aaPredicted RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 NT5C1AQ9BXI3 368 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 MRPS26Q9BYN8 205 aaKnown RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 C2orf40Q9H1Z8 148 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 R3HDMLQ9H3Y0 253 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 RHBDL2Q9NX52 303 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 TXNDC16Q9P2K2 825 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 MAGED2Q9UNF1 606 aaPredicted RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 TNFSF13BQ9Y275 285 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 LCTP09848 1927 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 A0A096LPK6 155 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 RGSL1A5PLK6 1076 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 RNF103O00237 685 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 MATN2O00339 956 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 TRPA1O75762 1119 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 TNFAIP8O95379 198 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 THRAP10827 490 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 ENO3P13929 434 aaPredicted RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 TCN1P20061 433 aaPredicted RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 EMP3P54852 163 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 METTL21CQ5VZV1 264 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 BNC2Q6ZN30 1099 aaPredicted RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 STRA8Q7Z7C7 330 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 FLAD1Q8NFF5 587 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 P2RY11Q96G91 374 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 RBBP8Q99708 897 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 MRPL1Q9BYD6 325 aaKnown RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 NUF2Q9BZD4 464 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 SEPT10Q9P0V9 454 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 TNS1Q9HBL0 1735 aaKnown RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 ANK1P16157 1881 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 A0A0J9YVX5 310 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 PRSS51A0A1B0GVH4 220 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 SOWAHBA6NEL2 793 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 TRIM13O60858 407 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 RNASEH2AO75792 299 aaKnown RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 PTPN1P18031 435 aaKnown RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 ATICP31939 592 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 SH3BGRP55822 239 aaPredicted RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 TMEM259Q4ZIN3 620 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 CLEC14AQ86T13 490 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 ZNF410Q86VK4 478 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 TMEM102Q8N9M5 508 aaPredicted RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 DNERQ8NFT8 737 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 OR52K1Q8NGK4 314 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 GAB3Q8WWW8 586 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 ISL2Q96A47 359 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 ZNF512Q96ME7 567 aaPredicted RBP11.12□□□□□ -0.63
RPE-202ENST00000359429 AGAP3Q96P47 875 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 CATSPER2Q96P56 530 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 WRNIP1Q96S55 665 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 CPNE1Q99829 537 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 SLC2A11Q9BYW1 496 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 DMTF1Q9Y222 760 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 SNX9Q9Y5X1 595 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 CEPT1Q9Y6K0 416 aa11.12□□□□□ -0.63
RPE-202ENST00000359429 C7orf72A4D263 438 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 ZNF487B1APH4 448 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 TK2O00142 265 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 NOP56O00567 594 aaKnown RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 PPEF2O14830 753 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 GRID2O43424 1007 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 C2P06681 752 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 SBK3P0C264 359 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 FAM58BPP0C7Q3 252 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 NELFEP18615 380 aaKnown RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 CYLC2Q14093 348 aaPredicted RBP11.11□□□□□ -0.63
RPE-202ENST00000359429 PPP2R5DQ14738 602 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 NRF1Q16656 503 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 USP41Q3LFD5 358 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 GRTP1Q5TC63 336 aa11.11□□□□□ -0.63
RPE-202ENST00000359429 EFCAB12Q6NXP0 572 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms