RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PTSQ03393 145 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 ACTRT2Q8TDY3 377 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 RORBQ92753 470 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 MYO3AQ8NEV4 1616 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 SPATA31A5Q5VU36 1347 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 SPATA31A7Q8IWB4 1347 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 INSRRP14616 1297 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 PPATQ06203 517 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 BCL2L1Q07817 233 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 EML3Q32P44 896 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 SNX32Q86XE0 403 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 SLC34A1Q06495 639 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 SLC25A24Q6NUK1 477 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 FAM20CQ8IXL6 584 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 RABGEF1Q9UJ41 708 aa18.7■□□□□ 0.58
SHANK1-202ENST00000359082 TEX28O15482 410 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 VPS4BO75351 444 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 YBX3P16989 372 aaKnown RBP eCLIP18.69■□□□□ 0.58
SHANK1-202ENST00000359082 MFSD10Q14728 455 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 METTL7BQ6UX53 244 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 KBTBD4Q9NVX7 518 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 KCNH1O95259 989 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 MED26O95402 600 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 SERPINH1P50454 418 aaKnown RBP18.69■□□□□ 0.58
SHANK1-202ENST00000359082 DMPKQ09013 629 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 SETMARQ53H47 684 aaPredicted RBP18.69■□□□□ 0.58
SHANK1-202ENST00000359082 S100A13Q99584 98 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 ARHGAP28Q9P2N2 729 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 COPG2Q9UBF2 871 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 LYVE1Q9Y5Y7 322 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 FAAP100Q0VG06 881 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 DGUOKQ16854 277 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 WASHC2DQ5SRD0 308 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 ARMC3Q5W041 872 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 ANKZF1Q9H8Y5 726 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 ADARB2Q9NS39 739 aaKnown RBP18.69■□□□□ 0.58
SHANK1-202ENST00000359082 TPRKBQ9Y3C4 175 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 CRATP43155 626 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 CCNIQ14094 377 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 NAIF1Q69YI7 327 aaPredicted RBP18.69■□□□□ 0.58
SHANK1-202ENST00000359082 RETSATQ6NUM9 610 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 TPGS1Q6ZTW0 290 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 SLC41A1Q8IVJ1 513 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 ZCCHC7Q8N3Z6 543 aaKnown RBP18.69■□□□□ 0.58
SHANK1-202ENST00000359082 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 LACRTQ9GZZ8 138 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 POLE3Q9NRF9 147 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 COG5Q9UP83 839 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 TPP1O14773 563 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 CDH8P55286 799 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 BTN2A1Q7KYR7 527 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 DEFB106AQ8N104 65 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 BHLHE22Q8NFJ8 381 aaPredicted RBP18.69■□□□□ 0.58
SHANK1-202ENST00000359082 CDRT15Q96T59 188 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 MTG1Q9BT17 334 aaPredicted RBP18.69■□□□□ 0.58
SHANK1-202ENST00000359082 ZCCHC2Q9C0B9 1178 aaKnown RBP18.69■□□□□ 0.58
SHANK1-202ENST00000359082 TKTL2Q9H0I9 626 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 CATSPERZQ9NTU4 200 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 KANSL3Q9P2N6 904 aa18.69■□□□□ 0.58
SHANK1-202ENST00000359082 IL12RB1P42701 662 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SLC2A14Q8TDB8 520 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 TRAPPC12Q8WVT3 735 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 TRAPPC9Q96Q05 1148 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 DGCR6LQ9BY27 220 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 CEP44Q9C0F1 390 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 XPNPEP3Q9NQH7 507 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 STON1Q9Y6Q2 735 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 MROH7Q68CQ1 1323 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 H3BRB1 525 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 EPN2O95208 641 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SETD9Q8NE22 299 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SYTL5Q8TDW5 730 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-202ENST00000359082 PDGFDQ9GZP0 370 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-202ENST00000359082 TUT1Q9H6E5 874 aaKnown RBP18.68■□□□□ 0.58
SHANK1-202ENST00000359082 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.68■□□□□ 0.58
SHANK1-202ENST00000359082 ENTPD4Q9Y227 616 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 NCKAP1Q9Y2A7 1128 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 MYRFQ9Y2G1 1151 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 AK9Q5TCS8 1911 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 HMGCRP04035 888 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 EPHX2P34913 555 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 IFNGR2P38484 337 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SPIDRQ14159 915 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 GPSM1Q86YR5 675 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SERPINB11Q96P15 392 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 VPS51Q9UID3 782 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 TMEM150BA6NC51 233 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 KPNA4O00629 521 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-202ENST00000359082 PECAM1P16284 738 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-202ENST00000359082 NR2C2P49116 596 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 CRY1Q16526 586 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SLC30A10Q6XR72 485 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SPATA20Q8TB22 786 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 COQ6Q9Y2Z9 468 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 ZBTB14O43829 449 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SNUPNO95149 360 aaKnown RBP18.68■□□□□ 0.58
SHANK1-202ENST00000359082 RPN2P04844 631 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 SLC26A2P50443 739 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 AMPD2Q01433 879 aa18.68■□□□□ 0.58
SHANK1-202ENST00000359082 NFE2Q16621 373 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms