RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 NDNQ99608 321 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 NFKBIZQ9BYH8 718 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 NUDT5Q9UKK9 219 aa13.08□□□□□ -0.32
SMC4-202ENST00000357388 FAM92AA1XBS5 289 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 NCF1BA6NI72 391 aaPredicted RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 NCF1CA8MVU1 366 aaPredicted RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 SNX3O60493 162 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 B3GAT3O94766 335 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 CBX6O95503 412 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 PROCP04070 461 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 NCF1P14598 390 aaPredicted RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 CYP2A7P20853 494 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 FAUP35544 74 aaKnown RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 TCF7P36402 384 aaPredicted RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 DPYSQ14117 519 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 NFE2Q16621 373 aaPredicted RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 FBXO39Q8N4B4 442 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 TMEM138Q9NPI0 162 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 KCND1Q9NSA2 647 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 CORO2BQ9UQ03 480 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 ERGIC3Q9Y282 383 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 LOC100506127A0A0U1RQW1 187 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 IFRD1O00458 451 aaPredicted RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 SEMA3DO95025 777 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 SERPINA1P01009 418 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 CYP11B1P15538 503 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 ITGA2P17301 1181 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 ACAT1P24752 427 aaKnown RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 LRPAP1P30533 357 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 DSG3P32926 999 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 CAPGP40121 348 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 HALP42357 657 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 OLR1P78380 273 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 RHAGQ02094 409 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 ZFP69Q49AA0 526 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 UBA3Q8TBC4 463 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 TBCBQ99426 244 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 GALNT8Q9NY28 637 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 CIDEBQ9UHD4 219 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 M0QYT0 321 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 MAP2K7O14733 419 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 HOXC6P09630 235 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 RPL14P50914 215 aaKnown RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 SKP1P63208 163 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 MRPS22P82650 360 aaKnown RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 CDH17Q12864 832 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 EZH2Q15910 746 aaKnown RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 CTXN3Q4LDR2 81 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 FGD3Q5JSP0 725 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 CXXC5Q7LFL8 322 aaKnown RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 ADGRE3Q9BY15 652 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 TRPC4Q9UBN4 977 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 CARD8Q9Y2G2 431 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 KPNA5O15131 536 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 NKRFO15226 690 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMC4-202ENST00000357388 PLEKP08567 350 aaPredicted RBP13.07□□□□□ -0.32
SMC4-202ENST00000357388 MYL9P24844 172 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 PARP6Q2NL67 630 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 MTSS1LQ765P7 747 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 KANSL3Q9P2N6 904 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 IRAK3Q9Y616 596 aa13.07□□□□□ -0.32
SMC4-202ENST00000357388 H3BNX3 289 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 EPN2O95208 641 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 PARNO95453 639 aaKnown RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 SGPL1O95470 568 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 PCNAP12004 261 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 VMP1Q96GC9 406 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 FICDQ9BVA6 458 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 PRPF19Q9UMS4 504 aaKnown RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 MTF2Q9Y483 593 aaPredicted RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 GMPPBQ9Y5P6 360 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 SQORQ9Y6N5 450 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 CFAP65Q6ZU64 1925 aaKnown RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 CCDC166P0CW27 439 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 SMCO1Q147U7 214 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 BTN2A1Q7KYR7 527 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 FAM220AQ7Z4H9 259 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 CBWD2Q8IUF1 395 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 RASSF5Q8WWW0 418 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 PYDC1Q8WXC3 89 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 HPS1Q92902 700 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 TPD52L3Q96J77 140 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 TCF12Q99081 682 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 ACOX2Q99424 681 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 CHCHD6Q9BRQ6 235 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 INVSQ9Y283 1065 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 TBC1D30Q9Y2I9 924 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 MED14O60244 1454 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 OGTO15294 1046 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 ITGB3P05106 788 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 SLC5A9Q2M3M2 681 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 THOC7Q6I9Y2 204 aaKnown RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 CYP2R1Q6VVX0 501 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 RASSF6Q6ZTQ3 369 aa13.06□□□□□ -0.32
SMC4-202ENST00000357388 ZNF512BQ96KM6 892 aaPredicted RBP13.06□□□□□ -0.32
SMC4-202ENST00000357388 AASDHPPTQ9NRN7 309 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms