RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 GPN1Q9HCN4 374 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 EIF2B3Q9NR50 452 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SLC5A9Q2M3M2 681 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ANKMY2Q8IV38 441 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 CD101Q93033 1021 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 FICDQ9BVA6 458 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 TAS2R13Q9NYV9 303 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 MAGED2Q9UNF1 606 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 TLL2Q9Y6L7 1015 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 BDP1A6H8Y1 2624 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 VAC14Q08AM6 782 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 AUHQ13825 339 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 APOBEC3FQ8IUX4 373 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.69□□□□□ -1.341e-6■■□□□ 13.9
VPS13B-202ENST00000357162 AGLP35573 1532 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 DHRS12A0PJE2 317 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ISPDA4D126 451 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 KLHL33A6NCF5 533 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 QSOX1O00391 747 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SYNCRIPO60506 623 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 APOL3O95236 402 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PABPC4LP0CB38 370 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PRKCEQ02156 737 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 EMC2Q15006 297 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 KLHL17Q6TDP4 642 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 TAS2R42Q7RTR8 314 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 MCOLN2Q8IZK6 566 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 RYBPQ8N488 228 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 NAT14Q8WUY8 206 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SLITRK1Q96PX8 696 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ZBED2Q9BTP6 218 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 JMJD4Q9H9V9 463 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 BTG4Q9NY30 223 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 BTN3A3O00478 584 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 A1BGP04217 495 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L8P0C7I0 530 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 VDRP11473 427 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 COX10Q12887 443 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PPP1R15BQ5SWA1 713 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 FLCNQ8NFG4 579 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PARD3BQ8TEW8 1205 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ART4Q93070 314 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 CGRRF1Q99675 332 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 DNAJC16Q9Y2G8 782 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 LOC100653049A0A140TA62 436 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 HLA-DRAP01903 254 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 S100A6P06703 90 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 LBPP18428 481 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 FBLN1P23142 703 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CDC25AP30304 524 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ZPBP2Q6X784 338 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 R3HCC1LQ7Z5L2 792 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CLVS1Q8IUQ0 354 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 TCP10LQ8TDR4 215 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 PURBQ96QR8 312 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 AP4B1Q9Y6B7 739 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 A0A0A0MRY4 1105 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 PRKAB2O43741 272 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 PSMA1P25786 263 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 NMT1P30419 496 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ACTR3P61158 418 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 HERVK_113P62684 666 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SV2CQ496J9 727 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 MTMR8Q96EF0 704 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SPATA13Q96N96 652 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 EPN2O95208 641 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 GPAT2Q6NUI2 795 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 OR8H2Q8N162 312 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 C7orf31Q8N865 590 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ITFG1Q8TB96 612 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SNRNP27Q8WVK2 155 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SGF29Q96ES7 293 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CENPNQ96H22 339 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 GMCL1Q96IK5 515 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SLC38A2Q96QD8 506 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SLC30A1Q9Y6M5 507 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 TEX46H3BTG2 121 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SNRPB2P08579 225 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 BNIP1Q12981 228 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 BNIPLQ7Z465 357 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 DENND6AQ8IWF6 608 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 C1orf21Q9H246 121 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 A0A1W2PRG6 482 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 RRN3P2A6NIE6 340 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 NPM3O75607 178 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 TCP10Q12799 353 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SF3B3Q15393 1217 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CDO1Q16878 200 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SH3KBP1Q96B97 665 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ELOVL6Q9H5J4 265 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CASS4Q9NQ75 786 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 DDX18Q9NVP1 670 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SMPD3Q9NY59 655 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 UBQLN1Q9UMX0 589 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 DOCK8Q8NF50 2099 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 PIPSLA2A3N6 862 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 RAB2AP61019 212 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 LGALS3BPQ08380 585 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 PTPRNQ16849 979 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 N4BP2L1Q5TBK1 243 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms