RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 PDPK2PQ6A1A2 396 aa18.08■□□□□ 0.48
GYPC-202ENST00000356887 PLD6Q8N2A8 252 aaKnown RBP18.08■□□□□ 0.48
GYPC-202ENST00000356887 KCTD13Q8WZ19 329 aa18.08■□□□□ 0.48
GYPC-202ENST00000356887 IFT43Q96FT9 208 aa18.08■□□□□ 0.48
GYPC-202ENST00000356887 PGLYRP2Q96PD5 576 aa18.08■□□□□ 0.48
GYPC-202ENST00000356887 NR1H4Q96RI1 486 aaPredicted RBP18.08■□□□□ 0.48
GYPC-202ENST00000356887 ECSITQ9BQ95 431 aa18.08■□□□□ 0.48
GYPC-202ENST00000356887 PCDHB12Q9Y5F1 795 aa18.08■□□□□ 0.48
GYPC-202ENST00000356887 KCNK1O00180 336 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 CLDN5O00501 218 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 MAP3K13O43283 966 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 BUD23O43709 281 aaKnown RBP18.07■□□□□ 0.48
GYPC-202ENST00000356887 HUS1O60921 280 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 WARSP23381 471 aaKnown RBP18.07■□□□□ 0.48
GYPC-202ENST00000356887 PTPN3P26045 913 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 SERPINB8P50452 374 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 RPS6KA3P51812 740 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 CACNA2D1P54289 1103 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 CCNA1P78396 465 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 SV2CQ496J9 727 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 VWA5B1Q5TIE3 1220 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 IZUMO2Q6UXV1 221 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 PAQR9Q6ZVX9 377 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 STRA8Q7Z7C7 330 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 TMEM135Q86UB9 458 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 OR6J1Q8NGC5 347 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 WNT8BQ93098 351 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 RNF39Q9H2S5 420 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 PIGVQ9NUD9 493 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 KLHL8Q9P2G9 620 aaPredicted RBP18.07■□□□□ 0.48
GYPC-202ENST00000356887 STAP1Q9ULZ2 295 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 E2F8A0AVK6 867 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 USP1O94782 785 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 AP2A1O95782 977 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 PEX19P40855 299 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 LIMK2P53671 638 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 DSG1Q02413 1049 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 NME3Q13232 169 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.07■□□□□ 0.48
GYPC-202ENST00000356887 ACTRT2Q8TDY3 377 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 GTF3C2Q8WUA4 911 aaPredicted RBP18.07■□□□□ 0.48
GYPC-202ENST00000356887 ZNF669Q96BR6 464 aaPredicted RBP18.07■□□□□ 0.48
GYPC-202ENST00000356887 CMTM5Q96DZ9 223 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 TSPAN18Q96SJ8 248 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 GOLGA2P5Q9HBQ8 144 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 CASS4Q9NQ75 786 aa18.07■□□□□ 0.48
GYPC-202ENST00000356887 PLXNB2O15031 1838 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 ZCWPW2A0A1B0GU75 182 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 G3V2L1 256 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 FAM72CH0Y354 149 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 XPOTO43592 962 aaKnown RBP18.06■□□□□ 0.48
GYPC-202ENST00000356887 ZNF189O75820 626 aaPredicted RBP18.06■□□□□ 0.48
GYPC-202ENST00000356887 MPOP05164 745 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 NPR3P17342 541 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 AXLP30530 894 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 ADRA1BP35368 520 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 SNAPC2Q13487 334 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 FAM72AQ5TYM5 149 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 FAM72DQ6L9T8 149 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 EPGNQ6UW88 154 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 HFE2Q6ZVN8 426 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 FAM72BQ86X60 149 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 DRAXINQ8NBI3 349 aaPredicted RBP18.06■□□□□ 0.48
GYPC-202ENST00000356887 RNF169Q8NCN4 708 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 SLC9A7Q96T83 725 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 BFARQ9NZS9 450 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 RAD54BQ9Y620 910 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 NRCAMQ92823 1304 aa18.06■□□□□ 0.48
GYPC-202ENST00000356887 USP12O75317 370 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 PTPN1P18031 435 aaKnown RBP18.05■□□□□ 0.48
GYPC-202ENST00000356887 ERCC2P18074 760 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 PRDX6P30041 224 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 GTF2A2P52657 109 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 LILRA4P59901 499 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 CCNIQ14094 377 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 ANKRD20A4Q4UJ75 823 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 KCTD11Q693B1 232 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 FSTL4Q6MZW2 842 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 PDZD4Q76G19 769 aaPredicted RBP18.05■□□□□ 0.48
GYPC-202ENST00000356887 CLEC14AQ86T13 490 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 TNS4Q8IZW8 715 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 TOP6BLQ8N6T0 577 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 AZIN2Q96A70 460 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 AGAP3Q96P47 875 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 AGAP2Q99490 1192 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 CDH19Q9H159 772 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 LRRC4Q9HBW1 653 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 VANGL2Q9ULK5 521 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 CDY2AQ9Y6F7 541 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 CDY1Q9Y6F8 540 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 TSC2P49815 1807 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 SMIM35A0A1B0GVV1 85 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 UNCXA6NJT0 531 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 FYNP06241 537 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 FESP07332 822 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 NCF2P19878 526 aaPredicted RBP18.05■□□□□ 0.48
GYPC-202ENST00000356887 ITGAXP20702 1163 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 SEMA3BQ13214 749 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 UBXN11Q5T124 520 aa18.05■□□□□ 0.48
GYPC-202ENST00000356887 RNF220Q5VTB9 566 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms