RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 SNX16P57768 344 aa14.22□□□□□ -0.13
LSS-201ENST00000356396 CBX2Q14781 532 aaPredicted RBP14.22□□□□□ -0.13
LSS-201ENST00000356396 FAM133BQ5BKY9 247 aaKnown RBP14.22□□□□□ -0.13
LSS-201ENST00000356396 PM20D1Q6GTS8 502 aa14.22□□□□□ -0.13
LSS-201ENST00000356396 HS6ST3Q8IZP7 471 aa14.22□□□□□ -0.13
LSS-201ENST00000356396 TCP10LQ8TDR4 215 aa14.22□□□□□ -0.13
LSS-201ENST00000356396 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
LSS-201ENST00000356396 ZNF669Q96BR6 464 aaPredicted RBP14.22□□□□□ -0.13
LSS-201ENST00000356396 SIGLEC10Q96LC7 697 aa14.22□□□□□ -0.13
LSS-201ENST00000356396 RUNDC3BQ96NL0 473 aa14.22□□□□□ -0.13
LSS-201ENST00000356396 QKIQ96PU8 341 aaKnown RBP eCLIP14.22□□□□□ -0.139e-17■■■■■ 29.6
LSS-201ENST00000356396 ZBED2Q9BTP6 218 aa14.22□□□□□ -0.13
LSS-201ENST00000356396 RPS6KL1Q9Y6S9 549 aa14.22□□□□□ -0.13
LSS-201ENST00000356396 SF3B1O75533 1304 aaKnown RBP eCLIP14.22□□□□□ -0.131e-6■■■■■ 118.4
LSS-201ENST00000356396 TRIOBPQ9H2D6 2365 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 A0A0A0MRY4 1105 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 GMNCA6NCL1 334 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 OAZ2O95190 189 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 SLC6A4P31645 630 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 GKP32189 559 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 CCR1P32246 355 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 PTPN7P35236 360 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 ARL13BQ3SXY8 428 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 LVRNQ6Q4G3 990 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 TPGS1Q6ZTW0 290 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 SPATA13Q96N96 652 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 ZDHHC4Q9NPG8 344 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 OGDHLQ9ULD0 1010 aa14.21□□□□□ -0.13
LSS-201ENST00000356396 ANTXRLA6NF34 631 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 PRRG1O14668 218 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 TRAPPC3O43617 180 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 CDH16O75309 829 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 NEBLO76041 1014 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 KLKB1P03952 638 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 IKBKEQ14164 716 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 MS4A13Q5J8X5 152 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 ARHGAP12Q8IWW6 846 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 FAXDC2Q96IV6 333 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 EPAS1Q99814 870 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 TSEN34Q9BSV6 310 aaKnown RBP14.21□□□□□ -0.14
LSS-201ENST00000356396 EPN3Q9H201 632 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 CWH43Q9H720 699 aa14.21□□□□□ -0.14
LSS-201ENST00000356396 RBM22Q9NW64 420 aaKnown RBP eCLIP14.21□□□□□ -0.142e-8■■■□□ 15
LSS-201ENST00000356396 HLA-DQB2P05538 268 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 NMBRP28336 390 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 GARSP41250 739 aaKnown RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 EIF3BP55884 814 aaKnown RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 SKOR1P84550 965 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 DSC2Q02487 901 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 CTBP1Q13363 440 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 NADSYN1Q6IA69 706 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 SYDE1Q6ZW31 735 aaPredicted RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 ATP11CQ8NB49 1132 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 SH3RF2Q8TEC5 729 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 PGM2Q96G03 612 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 TMEM169Q96HH4 297 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 NOL6Q9H6R4 1146 aaKnown RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 SUDS3Q9H7L9 328 aaPredicted RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 ABCC13Q9NSE7 274 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 TRIM33Q9UPN9 1127 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 NEU3Q9UQ49 428 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 HCFC2Q9Y5Z7 792 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 BCLAF3A2AJT9 711 aaKnown RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 SHOX2O60902 331 aaPredicted RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 INHBAP08476 426 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 TWF1Q12792 350 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 SEMA3BQ13214 749 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 FBXO48Q5FWF7 155 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 AGBL2Q5U5Z8 902 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 TRABD2AQ86V40 505 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 CDKL3Q8IVW4 592 aaPredicted RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 LGI2Q8N0V4 545 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 ARL14EPQ8N8R7 260 aaPredicted RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 MICAL1Q8TDZ2 1067 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 DCAKDQ8WVC6 231 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 ARNTL2Q8WYA1 636 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 BADQ92934 168 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 IGSF21Q96ID5 467 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 TGS1Q96RS0 853 aaKnown RBP14.2□□□□□ -0.14
LSS-201ENST00000356396 IKBKGQ9Y6K9 419 aa14.2□□□□□ -0.14
LSS-201ENST00000356396 HMX2A2RU54 273 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 HIDE1A8MVS5 230 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 MUSKO15146 869 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 TRIM24O15164 1050 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 WEE1P30291 646 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 NKX3-2P78367 333 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 LRRC6Q86X45 466 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 DENND6AQ8IWF6 608 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 DCP1BQ8IZD4 617 aaKnown RBP14.19□□□□□ -0.14
LSS-201ENST00000356396 TNS4Q8IZW8 715 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 MAB21L3Q8N8X9 362 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 FBXO21O94952 628 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 CCNB1P14635 433 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 GLRBP48167 497 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 GEMIN4P57678 1058 aaKnown RBP14.19□□□□□ -0.14
LSS-201ENST00000356396 NTHL1P78549 312 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 LRRC73Q5JTD7 316 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 RPS27LQ71UM5 84 aaKnown RBP14.19□□□□□ -0.14
LSS-201ENST00000356396 ATPAF2Q8N5M1 289 aa14.19□□□□□ -0.14
LSS-201ENST00000356396 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms