RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 RETREG1Q9H6L5 497 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 NHEJ1Q9H9Q4 299 aaPredicted RBP4.1□□□□□ -1.75
CNOT4-202ENST00000356162 LMAN1LQ9HAT1 526 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 CALCOCO1Q9P1Z2 691 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 UVRAGQ9P2Y5 699 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 ADAMTS1Q9UHI8 967 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 XPO7Q9UIA9 1087 aaKnown RBP4.1□□□□□ -1.75
CNOT4-202ENST00000356162 INTUQ9ULD6 942 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 MTF2Q9Y483 593 aaPredicted RBP4.1□□□□□ -1.75
CNOT4-202ENST00000356162 HS3ST4Q9Y661 456 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 DOCK4Q8N1I0 1966 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 NCOR1O75376 2440 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 PLXND1Q9Y4D7 1925 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 GOLGA6L7A0A1B0GV03 622 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 TMEM191CA6NGB0 347 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 EIF3CLB5ME19 914 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 NPC1O15118 1278 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 TSPAN3O60637 253 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 ATG13O75143 517 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 PAGE1O75459 146 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 LUC7L3O95232 432 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 DCNP07585 359 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 H2AFZP0C0S5 128 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CISD3P0C7P0 127 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CD72P21854 359 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 HTR7P34969 479 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 RFC1P35251 1148 aaPredicted RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CYLC1P35663 651 aaPredicted RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 SGSHP51688 502 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 GALCP54803 685 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 HDAC4P56524 1084 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 ATP11AP98196 1134 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 OGDHQ02218 1023 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 DMC1Q14565 340 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 ACAP1Q15027 740 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CDO1Q16878 200 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 C10orf76Q5T2E6 689 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 MANEALQ5VSG8 457 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 RFWD3Q6PCD5 774 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 LYPD4Q6UWN0 246 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 H2AFVQ71UI9 128 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 KIAA0907Q7Z7F0 614 aaPredicted RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 PHLDB2Q86SQ0 1253 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 FAM131BQ86XD5 332 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 MFN1Q8IWA4 741 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CCDC170Q8IYT3 715 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 ZNF683Q8IZ20 524 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 AHI1Q8N157 1196 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 NIPA2Q8N8Q9 360 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 USP33Q8TEY7 942 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 UCMAQ8WVF2 138 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CTNNBL1Q8WYA6 563 aaPredicted RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 EZH1Q92800 747 aaPredicted RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 TMA16Q96EY4 203 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 P2RY11Q96G91 374 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CCDC42Q96M95 316 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 EIF3CQ99613 913 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 NUP85Q9BW27 656 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 TKTL2Q9H0I9 626 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 OSBPL2Q9H1P3 480 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 WDCPQ9H6R7 721 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 GPAMQ9HCL2 828 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 LUC7LQ9NQ29 371 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 RBM12Q9NTZ6 932 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 SPATA6Q9NWH7 488 aaPredicted RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 MYO1AQ9UBC5 1043 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 PPARGC1AQ9UBK2 798 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 FBXO4Q9UKT5 387 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 PCDHGA11Q9Y5H2 935 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CKAP5Q14008 2032 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 FANCMQ8IYD8 2048 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 IGLV3-10A0A075B6K4 115 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 E9PAM4 449 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 K7EQS6 105 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 LAMTOR5O43504 91 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 PI15O43692 258 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CLDN11O75508 207 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 MTA2O94776 668 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 LCA5LO95447 670 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 ASLP04424 464 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 PABPC1P11940 636 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 TDGF1P13385 188 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 HOXC13P31276 330 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 MAN1A1P33908 653 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 GSK3AP49840 483 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 ZNF135P52742 658 aaPredicted RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 ATXN1P54253 815 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CDH4P55283 916 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 GSDMDP57764 484 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 RPL7AP62424 266 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 RPS24P62847 133 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 GFPT1Q06210 699 aaPredicted RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 ZNF252P-AS1Q0IIN9 211 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 SLC12A1Q13621 1099 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 CDH18Q13634 790 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 AUHQ13825 339 aaKnown RBP4.09□□□□□ -1.75
CNOT4-202ENST00000356162 ZNF528Q3MIS6 628 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 EFHC2Q5JST6 749 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 EOGTQ5NDL2 527 aa4.09□□□□□ -1.75
CNOT4-202ENST00000356162 FBXL22Q6P050 247 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms