RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PIP4P1Q86T03 277 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 STK40Q8N2I9 435 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 AADATQ8N5Z0 425 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 FRS2Q8WU20 508 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 RPRD1AQ96P16 312 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 NUP58Q9BVL2 599 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 MIR1-1HGQ9H1L0 117 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 PDCL3Q9H2J4 239 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
PDLIM7-201ENST00000355572 TEX33O43247 280 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 PLK1P53350 603 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 ECT2LQ008S8 904 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 CDR2Q01850 454 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 DEUP1Q05D60 604 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 ARID5BQ14865 1188 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 KCNT1Q5JUK3 1230 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 DAB2IPQ5VWQ8 1189 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 ZNF776Q68DI1 518 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 MMAAQ8IVH4 418 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 CADM4Q8NFZ8 388 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 FOXJ1Q92949 421 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 PGAP3Q96FM1 320 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 CAMK1GQ96NX5 476 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 C11orf70Q9BRQ4 267 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 PABPC3Q9H361 631 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 MPP6Q9NZW5 540 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 ZNF212Q9UDV6 495 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 SUN2Q9UH99 717 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 WASF3Q9UPY6 502 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 CEP83Q9Y592 693 aa17.23■□□□□ 0.35
PDLIM7-201ENST00000355572 A0A1W2PP55 124 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 SNAP91O60641 907 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 LSM8O95777 96 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 IGHV4-34P06331 123 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 SRPRAP08240 638 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 SLC2A3P11169 496 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 UNGP13051 313 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 SPINK2P20155 84 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 GLDCP23378 1020 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 OXTRP30559 389 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 SCNN1AP37088 669 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 GFPT1Q06210 699 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 ZNF252P-AS1Q0IIN9 211 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 CST6Q15828 149 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 C15orf59Q2T9L4 293 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 SLC25A52Q3SY17 297 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 ANO6Q4KMQ2 910 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 FAM131BQ86XD5 332 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 ZDHHC17Q8IUH5 632 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 CEP76Q8TAP6 659 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 BIRC7Q96CA5 298 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 FEM1AQ9BSK4 669 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 NEUROG2Q9H2A3 272 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 SARDHQ9UL12 918 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 KNL1Q8NG31 2342 aa17.22■□□□□ 0.35
PDLIM7-201ENST00000355572 A0A0D9SEW6 157 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 SPAARA0A1B0GVQ0 90 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 LRRC10BA6NIK2 292 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 K7ERQ8 282 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 WNT9AO14904 365 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 SEMA4FO95754 770 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 MT-CO1P00395 513 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 DNTTP04053 509 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 CSRP1P21291 193 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 MMP8P22894 467 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 DRD3P35462 400 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 DPP6P42658 865 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 PSMD8P48556 350 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 ST8SIA6P61647 398 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 ATP11AP98196 1134 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 WDR45BQ5MNZ6 344 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 RABGAP1LQ5R372 815 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 RNF219Q5W0B1 726 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 ZNF557Q8N988 423 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 KDM1BQ8NB78 822 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 SNX19Q92543 992 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 ERGIC2Q96RQ1 377 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 WDCPQ9H6R7 721 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 DNAAF2Q9NVR5 837 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 SLC12A6Q9UHW9 1150 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 NEU3Q9UQ49 428 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 TBC1D30Q9Y2I9 924 aa17.21■□□□□ 0.35
PDLIM7-201ENST00000355572 PTPRBP23467 1997 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 PLXNB3Q9ULL4 1909 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 EDDM13A0A1B0GTR0 161 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 A0A1B0GTW7 788 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 A0A1B0GVT2 93 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 DRGXA6NNA5 263 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 CSNK1EP49674 416 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 GALCP54803 685 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 UBXN1Q04323 297 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 E2F5Q15329 346 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 CCDC14Q49A88 953 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 BRMS1LQ5PSV4 323 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 FKBP15Q5T1M5 1219 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 SYCP2LQ5T4T6 812 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 E4F1Q66K89 784 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 TFAP2DQ7Z6R9 452 aa17.2■□□□□ 0.34
PDLIM7-201ENST00000355572 DNAAF5Q86Y56 855 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms