RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 BEST1O76090 585 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 PTPN4P29074 926 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 HTRA4P83105 476 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 KDSRQ06136 332 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 LRP8Q14114 963 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 NADK2Q4G0N4 442 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 B3GNT6Q6ZMB0 384 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 FAM183BPQ6ZVS7 135 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 JAMLQ86YT9 394 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 POU5F2Q8N7G0 328 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 ZFP28Q8NHY6 868 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 RAB3IL1Q8TBN0 382 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 NCSTNQ92542 709 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 KHSRPQ92945 711 aaKnown RBP eCLIP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 MYLPFQ96A32 169 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 SMOQ99835 787 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 FAM118BQ9BPY3 351 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 SHCBP1LQ9BZQ2 653 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 ANLNQ9NQW6 1124 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 AASDHPPTQ9NRN7 309 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 UTP6Q9NYH9 597 aaKnown RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 PRKAG2Q9UGJ0 569 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 IP6K2Q9UHH9 426 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 PRELID1Q9Y255 219 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 TRIM64CA6NLI5 447 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 HHLA1C9JL84 531 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 GSC2O15499 205 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 PAPSS1O43252 624 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 FGBP02675 491 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 KRT3P12035 628 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 PGM1P36871 562 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 CETN2P41208 172 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 AQP4P55087 323 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 OGDHQ02218 1023 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 MED21Q13503 144 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 GRAMD1BQ3KR37 738 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 MMEL1Q495T6 779 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 SFT2D3Q587I9 215 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 RAB41Q5JT25 222 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 VARS2Q5ST30 1063 aaKnown RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 TMEM240Q5SV17 173 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 RGS9BPQ6ZS82 235 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 NLRP9Q7RTR0 991 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 PATL1Q86TB9 770 aaKnown RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 ZMIZ2Q8NF64 920 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 DQX1Q8TE96 717 aaKnown RBP10.36□□□□□ -0.75
SYNE1-203ENST00000354674 OLFM3Q96PB7 478 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 THTPAQ9BU02 230 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 TRPC7Q9HCX4 862 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 TMEM30AQ9NV96 361 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 CROTQ9UKG9 612 aa10.36□□□□□ -0.75
SYNE1-203ENST00000354674 A0A1B0GTW7 788 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 POC1B-GALNT4F8VUJ3 575 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 PEX1O43933 1283 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 SORBS2O94875 1100 aaKnown RBP10.35□□□□□ -0.75
SYNE1-203ENST00000354674 LINC00271P0C7V0 271 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 RFC1P35251 1148 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-203ENST00000354674 RGS7P49802 495 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 SERPINB8P50452 374 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 SLC6A3Q01959 620 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 FAM171A1Q5VUB5 890 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 ZDHHC24Q6UX98 284 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 ARHGAP24Q8N264 748 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 RFWD2Q8NHY2 731 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 SMARCD1Q96GM5 515 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 IGSF21Q96ID5 467 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 C9orf72Q96LT7 481 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 MCEEQ96PE7 176 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 VN1R3Q9BXE9 311 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 SYNCQ9H7C4 482 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 SACM1LQ9NTJ5 587 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 ZDHHC18Q9NUE0 388 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 NDE1Q9NXR1 346 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 FBXO9Q9UK97 447 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-203ENST00000354674 PACSIN3Q9UKS6 424 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 PCDHA3Q9Y5H8 950 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 KIAA1671Q9BY89 1806 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 OR6C75A6NL08 312 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 H3BRJ5 948 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 GOLGA8RI6L899 631 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 ANPEPP15144 967 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 PORP16435 677 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-203ENST00000354674 ALDH7A1P49419 539 aaKnown RBP10.35□□□□□ -0.75
SYNE1-203ENST00000354674 WDR4P57081 412 aaKnown RBP10.35□□□□□ -0.75
SYNE1-203ENST00000354674 RELAQ04206 551 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 OGFOD2Q6N063 350 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 OTOP2Q7RTS6 562 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 TMCO2Q7Z6W1 182 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-203ENST00000354674 PIGZQ86VD9 579 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 CPNE8Q86YQ8 564 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 IQCF2Q8IXL9 164 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 C7orf61Q8IZ16 206 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 RASGEF1CQ8N431 466 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 STKLD1Q8NE28 680 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 JOSD2Q8TAC2 188 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 HERVK_113Q902F9 699 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 KLF6Q99612 283 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-203ENST00000354674 MRPL1Q9BYD6 325 aaKnown RBP10.35□□□□□ -0.75
SYNE1-203ENST00000354674 PNPLA8Q9NP80 782 aa10.35□□□□□ -0.75
SYNE1-203ENST00000354674 CHST7Q9NS84 486 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms