RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 DENND1AQ8TEH3 1009 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 SENP1Q9P0U3 644 aa14.23□□□□□ -0.13
TRIM4-201ENST00000349062 TPP1O14773 563 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 NDC80O14777 642 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 PAGE1O75459 146 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 CKBP12277 381 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 PTPN3P26045 913 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 TUBP50607 506 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 RTN4RL1Q86UN2 441 aaPredicted RBP14.22□□□□□ -0.13
TRIM4-201ENST00000349062 DBF4BQ8NFT6 615 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 TTC8Q8TAM2 541 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 PLAC1Q9HBJ0 212 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 C20orf96Q9NUD7 363 aaPredicted RBP14.22□□□□□ -0.13
TRIM4-201ENST00000349062 FBXW11Q9UKB1 542 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 MYO9BQ13459 2157 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 GCATO75600 419 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 ZWINTO95229 277 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 CTXN3Q4LDR2 81 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 PLEKHG4Q58EX7 1191 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 TMEM86AQ8N2M4 240 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 GBP7Q8N8V2 638 aaPredicted RBP14.22□□□□□ -0.13
TRIM4-201ENST00000349062 MAB21L3Q8N8X9 362 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 FCRL2Q96LA5 508 aaPredicted RBP14.22□□□□□ -0.13
TRIM4-201ENST00000349062 TSC22D3Q99576 134 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 C11orf84Q9BUA3 381 aaPredicted RBP14.22□□□□□ -0.13
TRIM4-201ENST00000349062 RXFP1Q9HBX9 757 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 IARS2Q9NSE4 1012 aaKnown RBP14.22□□□□□ -0.13
TRIM4-201ENST00000349062 ZFP69BQ9UJL9 534 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 DPPA5A6NC42 116 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 EDF1O60869 148 aaKnown RBP14.22□□□□□ -0.13
TRIM4-201ENST00000349062 ABL2P42684 1182 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 CHRNA4P43681 627 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 RIPK1Q13546 671 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 SPOUT1Q5T280 376 aaKnown RBP14.22□□□□□ -0.13
TRIM4-201ENST00000349062 PDZD4Q76G19 769 aaPredicted RBP14.22□□□□□ -0.13
TRIM4-201ENST00000349062 LMNTD2Q8IXW0 634 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 CDKL2Q92772 493 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 APOPT1Q96IL0 206 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 BFARQ9NZS9 450 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 CHKBQ9Y259 395 aa14.22□□□□□ -0.13
TRIM4-201ENST00000349062 SERPINB3P29508 390 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 CXCR3P49682 368 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 C14orf80Q86SX3 495 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 RNF135Q8IUD6 432 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 SGF29Q96ES7 293 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 CAPNS2Q96L46 248 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 XAB2Q9HCS7 855 aaKnown RBP14.21□□□□□ -0.13
TRIM4-201ENST00000349062 LRFN2Q9ULH4 789 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 FIS1Q9Y3D6 152 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 Q9Y3F1 56 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 GOLGA8CPA6NN73 597 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 PRPF4O43172 522 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRIM4-201ENST00000349062 MYL2P10916 166 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 ARFIP2P53365 341 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 USP46P62068 366 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 PSMD5Q16401 504 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 STRA8Q7Z7C7 330 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 TDRPQ86YL5 185 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 ATPAF2Q8N5M1 289 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 PCSK9Q8NBP7 692 aaKnown RBP14.21□□□□□ -0.13
TRIM4-201ENST00000349062 RAB3IPQ96QF0 476 aaPredicted RBP14.21□□□□□ -0.13
TRIM4-201ENST00000349062 TRIM55Q9BYV6 548 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 DLGAP2Q9P1A6 1054 aa14.21□□□□□ -0.13
TRIM4-201ENST00000349062 PPARGC1AQ9UBK2 798 aaKnown RBP14.21□□□□□ -0.13
TRIM4-201ENST00000349062 KPNA6O60684 536 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 BST1Q10588 318 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 MBTPS1Q14703 1052 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 C10orf120Q5SQS8 335 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 N4BP2L1Q5TBK1 243 aaPredicted RBP14.2□□□□□ -0.14
TRIM4-201ENST00000349062 TMEM154Q6P9G4 183 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 ALYREFQ86V81 257 aaKnown RBP14.2□□□□□ -0.14
TRIM4-201ENST00000349062 CFAP52Q8N1V2 620 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 FCRL3Q96P31 734 aaPredicted RBP14.2□□□□□ -0.14
TRIM4-201ENST00000349062 SLC39A10Q9ULF5 831 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 ACTL7BQ9Y614 415 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 USP3Q9Y6I4 520 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 TLL2Q9Y6L7 1015 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 DGKIO75912 1065 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 SMNDC1O75940 238 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRIM4-201ENST00000349062 FBXO21O94952 628 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 ALDH18A1P54886 795 aaKnown RBP14.2□□□□□ -0.14
TRIM4-201ENST00000349062 CLLU1OSQ5K130 101 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 PAF1Q8N7H5 531 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 TET1Q8NFU7 2136 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 RNF217Q8TC41 542 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 ATP2A3Q93084 1043 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 TBC1D13Q9NVG8 400 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 GMIPQ9P107 970 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 PHGDHO43175 533 aaKnown RBP14.2□□□□□ -0.14
TRIM4-201ENST00000349062 OPHN1O60890 802 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 POLBP06746 335 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 PIRTP0C851 137 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 ZNF460Q14592 562 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 PRSS55Q6UWB4 352 aaPredicted RBP14.2□□□□□ -0.14
TRIM4-201ENST00000349062 SMC1BQ8NDV3 1235 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 SCYL1Q96KG9 808 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 TMEM120AQ9BXJ8 343 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 CCDC134Q9H6E4 229 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 CHST12Q9NRB3 414 aa14.2□□□□□ -0.14
TRIM4-201ENST00000349062 PCDHA11Q9Y5I1 949 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms