RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 OR5B17Q8NGF7 314 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 VCPIP1Q96JH7 1222 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 ZNF696Q9H7X3 374 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 PALMDQ9NP74 551 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 CCDC167Q9P0B6 97 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 STK39Q9UEW8 545 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 EGFL7Q9UHF1 273 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 TMX2Q9Y320 296 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 TEX264Q9Y6I9 313 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 PTPRJQ12913 1337 aa15.5■□□□□ 0.07
PTBP1-201ENST00000349038 FGF3P11487 239 aaPredicted RBP15.49■□□□□ 0.07
PTBP1-201ENST00000349038 KDELR1P24390 212 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 SF3B4Q15427 424 aaKnown RBP eCLIP15.49■□□□□ 0.073e-7■■■■□ 24.1
PTBP1-201ENST00000349038 ZNF618Q5T7W0 954 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 IL31RAQ8NI17 732 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 BSNDQ8WZ55 320 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 NKD2Q969F2 451 aaPredicted RBP15.49■□□□□ 0.07
PTBP1-201ENST00000349038 FBXL20Q96IG2 436 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 MIR1-1HGQ9H1L0 117 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 EPB41L1Q9H4G0 881 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 ZNF229Q9UJW7 825 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 POLIQ9UNA4 740 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 FADS3Q9Y5Q0 445 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 TMEM233B4DJY2 109 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 LRCH4O75427 683 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 DPP6P42658 865 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 HSD17B4P51659 736 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 XIAPP98170 497 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 ANGEL2Q5VTE6 544 aaKnown RBP15.49■□□□□ 0.07
PTBP1-201ENST00000349038 PHF13Q86YI8 300 aaPredicted RBP15.49■□□□□ 0.07
PTBP1-201ENST00000349038 DGCR6LQ9BY27 220 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 CEP44Q9C0F1 390 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 RIMS3Q9UJD0 308 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 UBR3Q6ZT12 1888 aa15.49■□□□□ 0.07
PTBP1-201ENST00000349038 A0A1W2PQ67 120 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 CPA3P15088 417 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 ACO1P21399 889 aaKnown RBP15.48■□□□□ 0.07
PTBP1-201ENST00000349038 ABCE1P61221 599 aaKnown RBP15.48■□□□□ 0.07
PTBP1-201ENST00000349038 PMS2P3Q13401 168 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 TUBB3Q13509 450 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 PIWIL3Q7Z3Z3 882 aaKnown RBP15.48■□□□□ 0.07
PTBP1-201ENST00000349038 LDHDQ86WU2 507 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 HERC6Q8IVU3 1022 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 C4orf19Q8IY42 314 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 UBR7Q8N806 425 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 MAGEB5Q9BZ81 275 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 ADNPQ9H2P0 1102 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 PTPRHQ9HD43 1115 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 COL20A1Q9P218 1284 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 SLC27A5Q9Y2P5 690 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 SERPINE1P05121 402 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 FKBP1AP62942 108 aaKnown RBP15.48■□□□□ 0.07
PTBP1-201ENST00000349038 TFAMQ00059 246 aaKnown RBP15.48■□□□□ 0.07
PTBP1-201ENST00000349038 PFKPQ01813 784 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 MBLAC2Q68D91 279 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 SIX6OS1Q8N1H7 587 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 GPD1LQ8N335 351 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 CLIP4Q8N3C7 705 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 CHURC1Q8WUH1 139 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 ELMO1Q92556 727 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 BORCS5Q969J3 196 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 DBNDD1Q9H9R9 158 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 TMEM98Q9Y2Y6 226 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 HMX2A2RU54 273 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 KCNU1A8MYU2 1149 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 MIPP30301 263 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 TKFCQ3LXA3 575 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 SH2D5Q6ZV89 423 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 PODNQ7Z5L7 613 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 PLD6Q8N2A8 252 aaKnown RBP15.48■□□□□ 0.07
PTBP1-201ENST00000349038 ATP6V0A1Q93050 837 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 CCDC90BQ9GZT6 254 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 CLK4Q9HAZ1 481 aaKnown RBP15.48■□□□□ 0.07
PTBP1-201ENST00000349038 FAM32AQ9Y421 112 aaKnown RBP15.48■□□□□ 0.07
PTBP1-201ENST00000349038 UBIAD1Q9Y5Z9 338 aa15.48■□□□□ 0.07
PTBP1-201ENST00000349038 MRPL42Q9Y6G3 142 aaKnown RBP15.48■□□□□ 0.07
PTBP1-201ENST00000349038 CST3P01034 146 aaPredicted RBP15.47■□□□□ 0.07
PTBP1-201ENST00000349038 LTFP02788 710 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 JUNP05412 331 aaKnown RBP15.47■□□□□ 0.07
PTBP1-201ENST00000349038 PTPN7P35236 360 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 GRIA3P42263 894 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 CDH8P55286 799 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 BCAR1P56945 870 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 DACT2Q5SW24 774 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 OTUD3Q5T2D3 398 aaPredicted RBP15.47■□□□□ 0.07
PTBP1-201ENST00000349038 RPS27LQ71UM5 84 aaKnown RBP15.47■□□□□ 0.07
PTBP1-201ENST00000349038 CBR4Q8N4T8 237 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 UBA3Q8TBC4 463 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 KBTBD7Q8WVZ9 684 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 TMEM143Q96AN5 459 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 OMDQ99983 421 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 APOL2Q9BQE5 337 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 EHD1Q9H4M9 534 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 ATP6AP2A0A1C7CYW4 349 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 CNOT3O75175 753 aaKnown RBP15.47■□□□□ 0.07
PTBP1-201ENST00000349038 ATP6AP2O75787 350 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 VAPBO95292 243 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 HMGCRP04035 888 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 CD151P48509 253 aa15.47■□□□□ 0.07
PTBP1-201ENST00000349038 ADAM17P78536 824 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms