RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 STARD13Q9Y3M8 1113 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 MTF2Q9Y483 593 aaPredicted RBP12.18□□□□□ -0.46
SNCA-202ENST00000345009 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 SHISA7A6NL88 538 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 H3BRJ5 948 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 I6L893 689 aaPredicted RBP12.17□□□□□ -0.46
SNCA-202ENST00000345009 K7EQS6 105 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 EEF2KO00418 725 aaKnown RBP12.17□□□□□ -0.46
SNCA-202ENST00000345009 ASLP04424 464 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 DCNP07585 359 aaKnown RBP12.17□□□□□ -0.46
SNCA-202ENST00000345009 HLA-FP30511 346 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 AVPR2P30518 371 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 GGCXP38435 758 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 NNMTP40261 264 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 HCAR3P49019 387 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 SGSHP51688 502 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 PDK2Q15119 407 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 RNF219Q5W0B1 726 aaPredicted RBP12.17□□□□□ -0.46
SNCA-202ENST00000345009 CWF19L1Q69YN2 538 aaKnown RBP12.17□□□□□ -0.46
SNCA-202ENST00000345009 POLNQ7Z5Q5 900 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 RHOT1Q8IXI2 618 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 ZNF683Q8IZ20 524 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 PHTF2Q8N3S3 785 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 SPEM1Q8N4L4 309 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNCA-202ENST00000345009 KIAA1524Q8TCG1 905 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 HSPH1Q92598 858 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 PRRX2Q99811 253 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 SNRNP25Q9BV90 132 aaKnown RBP12.17□□□□□ -0.46
SNCA-202ENST00000345009 MUC3BQ9H195 1237 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 CHRDQ9H2X0 955 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNCA-202ENST00000345009 MPP6Q9NZW5 540 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 RCOR3Q9P2K3 495 aaPredicted RBP12.17□□□□□ -0.46
SNCA-202ENST00000345009 HPCAL4Q9UM19 191 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 TBC1D30Q9Y2I9 924 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 REXO2Q9Y3B8 237 aaKnown RBP12.17□□□□□ -0.46
SNCA-202ENST00000345009 SNX10Q9Y5X0 201 aa12.17□□□□□ -0.46
SNCA-202ENST00000345009 ILVBLA1L0T0 632 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 BUB1BO60566 1050 aaPredicted RBP12.16□□□□□ -0.46
SNCA-202ENST00000345009 RHOCP08134 193 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 RARAP10276 462 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 PLK1P53350 603 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 SEC13P55735 322 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 ST8SIA6P61647 398 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 LMAN2Q12907 356 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 DPYSL2Q16555 572 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 SMTNL2Q2TAL5 461 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 C2orf27AQ580R0 203 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 KCNT1Q5JUK3 1230 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 EOGTQ5NDL2 527 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 MANEALQ5VSG8 457 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 NAIF1Q69YI7 327 aaPredicted RBP12.16□□□□□ -0.46
SNCA-202ENST00000345009 C11orf63Q6NUN7 778 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 NYAP1Q6ZVC0 841 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 TFAP2DQ7Z6R9 452 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 CIR1Q86X95 450 aaPredicted RBP12.16□□□□□ -0.46
SNCA-202ENST00000345009 PYROXD2Q8N2H3 581 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 ZNF513Q8N8E2 541 aaPredicted RBP12.16□□□□□ -0.46
SNCA-202ENST00000345009 TPCN2Q8NHX9 752 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 FEM1AQ9BSK4 669 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 C2orf49Q9BVC5 232 aaPredicted RBP12.16□□□□□ -0.46
SNCA-202ENST00000345009 LACRTQ9GZZ8 138 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 RBM12Q9NTZ6 932 aaKnown RBP12.16□□□□□ -0.46
SNCA-202ENST00000345009 TMEM248Q9NWD8 314 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 SPATA6Q9NWH7 488 aaPredicted RBP12.16□□□□□ -0.46
SNCA-202ENST00000345009 DDX56Q9NY93 547 aaKnown RBP12.16□□□□□ -0.46
SNCA-202ENST00000345009 VPS28Q9UK41 221 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 CLEC4EQ9ULY5 219 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 SLC8A2Q9UPR5 921 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 ALG6Q9Y672 507 aa12.16□□□□□ -0.46
SNCA-202ENST00000345009 MYO18AQ92614 2054 aaKnown RBP12.15□□□□□ -0.46
SNCA-202ENST00000345009 MACROD2A1Z1Q3 448 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CHURC1-FNTBB4DL54 471 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 PRRT4C9JH25 899 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 FAM72CH0Y354 149 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 TRIM24O15164 1050 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 ZSCAN12O43309 604 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 LAMTOR5O43504 91 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 BUB1O43683 1085 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 PI15O43692 258 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CNTN5O94779 1100 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 DLDP09622 509 aaKnown RBP12.15□□□□□ -0.46
SNCA-202ENST00000345009 HNRNPLP14866 589 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNCA-202ENST00000345009 COMTP21964 271 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 IL1R2P27930 398 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 NTSR1P30989 418 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CD70P32970 193 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 GJC1P36383 396 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CXCL12P48061 93 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CCR3P51677 355 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CDH6P55285 790 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CCZ1BP86790 482 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CCZ1P86791 482 aaPredicted RBP12.15□□□□□ -0.46
SNCA-202ENST00000345009 SLC25A11Q02978 314 aaKnown RBP12.15□□□□□ -0.46
SNCA-202ENST00000345009 SEMA3BQ13214 749 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 FZD5Q13467 585 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 STARD3Q14849 445 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 GEN1Q17RS7 908 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms