RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 C6orf222P0C671 652 aaPredicted RBP21.9■■□□□ 1.1
CCDC38-201ENST00000344280 TPH1P17752 444 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 NFKB1P19838 968 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 PGM1P36871 562 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 FKBP1BP68106 108 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 NAB1Q13506 487 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 RCN1Q15293 331 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 HSP90AA5PQ58FG0 334 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 STRA8Q7Z7C7 330 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 TMEM135Q86UB9 458 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 MAB21L3Q8N8X9 362 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 ACVR1CQ8NER5 493 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 PGAP3Q96FM1 320 aaPredicted RBP21.9■■□□□ 1.1
CCDC38-201ENST00000344280 CLPTM1LQ96KA5 538 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 CPNE1Q99829 537 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 WDCPQ9H6R7 721 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 LRRC40Q9H9A6 602 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 CASS4Q9NQ75 786 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 SLC38A7Q9NVC3 462 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 PNPOQ9NVS9 261 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 COPG2Q9UBF2 871 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 LRRC42Q9Y546 428 aa21.9■■□□□ 1.1
CCDC38-201ENST00000344280 MRPL42Q9Y6G3 142 aaKnown RBP21.9■■□□□ 1.1
CCDC38-201ENST00000344280 GOLGA8TH3BQL2 631 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 CAPN15O75808 1086 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 GNAT1P11488 350 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 GARSP41250 739 aaKnown RBP21.89■■□□□ 1.09
CCDC38-201ENST00000344280 AIF1P55008 147 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 CDK18Q07002 472 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 FSTL4Q6MZW2 842 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.89■■□□□ 1.09
CCDC38-201ENST00000344280 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.89■■□□□ 1.09
CCDC38-201ENST00000344280 MYLPFQ96A32 169 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 NAF1Q96HR8 494 aaKnown RBP21.89■■□□□ 1.09
CCDC38-201ENST00000344280 RBBP8Q99708 897 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 CHRAC1Q9NRG0 131 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 EIF4E1BA6NMX2 242 aaKnown RBP21.89■■□□□ 1.09
CCDC38-201ENST00000344280 CHRNA1P02708 482 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 SERPINA6P08185 405 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 FAM163BP0C2L3 166 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 HCAR3P49019 387 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 ERFP50548 548 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 IRF9Q00978 393 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 IRF5Q13568 498 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 ANKRD20A4Q4UJ75 823 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 TAF2Q6P1X5 1199 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 TMEM86AQ8N2M4 240 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 ZSCAN18Q8TBC5 510 aaPredicted RBP21.89■■□□□ 1.09
CCDC38-201ENST00000344280 GBA3Q9H227 469 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 BFARQ9NZS9 450 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 TAGLN3Q9UI15 199 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 PLA2G4CQ9UP65 541 aa21.89■■□□□ 1.09
CCDC38-201ENST00000344280 CCDC78A2IDD5 438 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 SERPINE1P05121 402 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 PGGT1BP53609 377 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 GRTP1Q5TC63 336 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 GDF6Q6KF10 455 aaPredicted RBP21.88■■□□□ 1.09
CCDC38-201ENST00000344280 CXCL17Q6UXB2 119 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 PDZD4Q76G19 769 aaPredicted RBP21.88■■□□□ 1.09
CCDC38-201ENST00000344280 TAC4Q86UU9 113 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 TMPRSS6Q8IU80 811 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 DTX3LQ8TDB6 740 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 NRG4Q8WWG1 115 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 HDAC11Q96DB2 347 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 OXCT2Q9BYC2 517 aaPredicted RBP21.88■■□□□ 1.09
CCDC38-201ENST00000344280 MMADHCQ9H3L0 296 aaPredicted RBP21.88■■□□□ 1.09
CCDC38-201ENST00000344280 CDH9Q9ULB4 789 aa21.88■■□□□ 1.09
CCDC38-201ENST00000344280 BDNFP23560 247 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 ABL2P42684 1182 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 CXCR3P49682 368 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 GALNT2Q10471 571 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 ITGA9Q13797 1035 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 ARL13BQ3SXY8 428 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 VWA5B1Q5TIE3 1220 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 TRIM68Q6AZZ1 485 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 WDR75Q8IWA0 830 aaKnown RBP21.87■■□□□ 1.09
CCDC38-201ENST00000344280 HASPINQ8TF76 798 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 SMARCD1Q96GM5 515 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 FAM161BQ96MY7 647 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 AGO3Q9H9G7 860 aaKnown RBP21.87■■□□□ 1.09
CCDC38-201ENST00000344280 TMLHEQ9NVH6 421 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.87■■□□□ 1.09
CCDC38-201ENST00000344280 MEI4A8MW99 385 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 JCHAINP01591 159 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 MAGEA12P43365 314 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 LIMK2P53671 638 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 THOC5Q13769 683 aaKnown RBP21.87■■□□□ 1.09
CCDC38-201ENST00000344280 UPP1Q16831 310 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 ARHGAP36Q6ZRI8 547 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 TRPV1Q8NER1 839 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 SHKBP1Q8TBC3 707 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 DPF3Q92784 378 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 TMEM209Q96SK2 561 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 FAM167BQ9BTA0 163 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 TRPV2Q9Y5S1 764 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 PTCH2Q9Y6C5 1203 aa21.87■■□□□ 1.09
CCDC38-201ENST00000344280 NCAM2O15394 837 aa21.86■■□□□ 1.09
CCDC38-201ENST00000344280 TBX10O75333 385 aa21.86■■□□□ 1.09
CCDC38-201ENST00000344280 USP1O94782 785 aa21.86■■□□□ 1.09
CCDC38-201ENST00000344280 BRCC3P46736 316 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms