RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 PGS1Q32NB8 556 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ZACNQ401N2 412 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 MARC1Q5VT66 337 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 OVOS1Q6IE37 1185 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 SLC51AQ86UW1 340 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ZBTB8BQ8NAP8 495 aaPredicted RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 JOSD2Q8TAC2 188 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 SLC16A10Q8TF71 515 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 RBBP8Q99708 897 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 CPNE1Q99829 537 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 TTYH3Q9C0H2 523 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 CCDC167Q9P0B6 97 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 RSL24D1Q9UHA3 163 aaKnown RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 KNDC1Q76NI1 1749 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 PEX1O43933 1283 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 CDH2P19022 906 aaPredicted RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 BDNFP23560 247 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 EPHX2P34913 555 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 NR2C2P49116 596 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 NAA20P61599 178 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ST8SIA6P61647 398 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 BEX3Q00994 111 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 CCDC153Q494R4 210 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 SPANXN3Q5MJ09 141 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 TMEM63BQ5T3F8 832 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 EEF1DP3Q658K8 133 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 EFL1Q7Z2Z2 1120 aaKnown RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 LPCAT1Q8NF37 534 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF384Q8TF68 577 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF317Q96PQ6 595 aaPredicted RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ACO2Q99798 780 aaKnown RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 CDT1Q9H211 546 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 TMEM134Q9H6X4 195 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 SPASTQ9UBP0 616 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 ZMYND8Q9ULU4 1186 aaPredicted RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 EIF3LQ9Y262 564 aaKnown RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 DRG1Q9Y295 367 aaKnown RBP8.22□□□□□ -1.09
UBE4B-202ENST00000343090 WDR37Q9Y2I8 494 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 LRRC42Q9Y546 428 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 WASF2Q9Y6W5 498 aa8.22□□□□□ -1.09
UBE4B-202ENST00000343090 C15orf38-AP3S2A0A0A6YYH1 394 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 EDF1O60869 148 aaKnown RBP8.21□□□□□ -1.09
UBE4B-202ENST00000343090 DDHD2O94830 711 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 MBL2P11226 248 aaPredicted RBP8.21□□□□□ -1.09
UBE4B-202ENST00000343090 ALDH7A1P49419 539 aaKnown RBP8.21□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF143P52747 638 aaPredicted RBP8.21□□□□□ -1.09
UBE4B-202ENST00000343090 MAPK10P53779 464 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 NR1H2P55055 460 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 PRKAA1Q13131 559 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 UBAP2LQ14157 1087 aaKnown RBP8.21□□□□□ -1.09
UBE4B-202ENST00000343090 ATP6AP1LQ52LC2 224 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 ARPINQ7Z6K5 226 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 PHF13Q86YI8 300 aaPredicted RBP8.21□□□□□ -1.09
UBE4B-202ENST00000343090 CCDC103Q8IW40 242 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 BSNDQ8WZ55 320 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 CDCA5Q96FF9 252 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 GLT1D1Q96MS3 346 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 SH3GL1Q99961 368 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 TEX12Q9BXU0 123 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 C12orf65Q9H3J6 166 aaKnown RBP8.21□□□□□ -1.09
UBE4B-202ENST00000343090 POMKQ9H5K3 350 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF556Q9HAH1 456 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 CDHR5Q9HBB8 845 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 NMRAL1Q9HBL8 299 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 FBXO6Q9NRD1 293 aaPredicted RBP8.21□□□□□ -1.09
UBE4B-202ENST00000343090 MRGBPQ9NV56 204 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 CRYL1Q9Y2S2 319 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 RBMX2Q9Y388 322 aaKnown RBP8.21□□□□□ -1.09
UBE4B-202ENST00000343090 NR2E1Q9Y466 385 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 SLIT3O75094 1523 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 C3P01024 1663 aa8.21□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF839A8K0R7 811 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 BUD23O43709 281 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 PIGNO95427 931 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CCNE2O96020 404 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CDH3P22223 829 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CLK1P49759 484 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 DRG2P55039 364 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 FKBP1AP62942 108 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 PWP1Q13610 501 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 ACVR2BQ13705 512 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 TBCELQ5QJ74 424 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CATSPERGQ6ZRH7 1159 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 TMC7Q7Z402 723 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 PPP1R10Q96QC0 940 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 ACOX2Q99424 681 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 SLC17A7Q9P2U7 560 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 RABGEF1Q9UJ41 708 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 MYRFQ9Y2G1 1151 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 DLG5Q8TDM6 1919 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 RICTORQ6R327 1708 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 A0A1B0GVG6 124 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 NCAM2O15394 837 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 PEX10O60683 326 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 LTFP02788 710 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 SNHG28P0DPA3 235 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 FGFR3P22607 806 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 BST1Q10588 318 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms