RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TTC7BQ86TV6 843 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 TRPM4Q8TD43 1214 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 RSPH1Q8WYR4 309 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 MKL1Q969V6 931 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 PAPOLBQ9NRJ5 636 aaKnown RBP15.27■□□□□ 0.04
UBE3B-202ENST00000342494 CATSPERZQ9NTU4 200 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 COMMD8Q9NX08 183 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 DNALI1O14645 258 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-202ENST00000342494 IL1BP01584 269 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 HOXB8P17481 243 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-202ENST00000342494 FLT3LGP49771 235 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 NACC2Q96BF6 587 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 ZMAT2Q96NC0 199 aaKnown RBP15.27■□□□□ 0.03
UBE3B-202ENST00000342494 MLPHQ9BV36 600 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-202ENST00000342494 TMEM88BA6NKF7 163 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 JAK1P23458 1154 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 SERPINB3P29508 390 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 PFKPQ01813 784 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 CBWD6Q4V339 395 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 COMMD2Q86X83 199 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 CENPTQ96BT3 561 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 TMEM120AQ9BXJ8 343 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 SLC28A3Q9HAS3 691 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 CDHR5Q9HBB8 845 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 AVENQ9NQS1 362 aaPredicted RBP15.27■□□□□ 0.03
UBE3B-202ENST00000342494 GPSM3Q9Y4H4 160 aa15.27■□□□□ 0.03
UBE3B-202ENST00000342494 UBTFL6P0CB48 400 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 CRYBB1P53674 252 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 CYP4X1Q8N118 509 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 ELMO1Q92556 727 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 QRFPRQ96P65 431 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 WDR18Q9BV38 432 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 FAM126AQ9BYI3 521 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 ATP6V1HQ9UI12 483 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 COL5A2P05997 1499 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 MAFO75444 373 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 CXCL14O95715 111 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 HTR1BP28222 390 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 ACSM2AQ08AH3 577 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 KCNMA1Q12791 1236 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 SPIDRQ14159 915 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 ACSM2BQ68CK6 577 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 RBM43Q6ZSC3 357 aaKnown RBP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 CEP68Q76N32 757 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 PLPPR4Q7Z2D5 763 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 FIG4Q92562 907 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 TCF7L2Q9NQB0 619 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 TBC1D23Q9NUY8 699 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 ANKRD6Q9Y2G4 727 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 SLC27A5Q9Y2P5 690 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 STARD13Q9Y3M8 1113 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 ZNF711Q9Y462 761 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 CCDC189A1A4V9 331 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 USP12O75317 370 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 UMPSP11172 480 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 PAX3P23760 479 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 CASP7P55210 303 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 PTENP60484 403 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 CATSPER2Q96P56 530 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 TM6SF2Q9BZW4 377 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 ATP13A3Q9H7F0 1226 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 TK2O00142 265 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 HS6ST1O60243 411 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 TRIM13O60858 407 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 GJB6O95452 261 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 IFNA16P05015 189 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 HPCAL1P37235 193 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 FEN1P39748 380 aaKnown RBP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 RAD23AP54725 363 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 IL2P60568 153 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 GRIK3Q13003 919 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 PAPD7Q5XG87 772 aaKnown RBP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 TMEM154Q6P9G4 183 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 GPSM1Q86YR5 675 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 ASB8Q9H765 288 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 HAO1Q9UJM8 370 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 TISP43B9A030 160 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 RPL9P32969 192 aaKnown RBP15.26■□□□□ 0.03
UBE3B-202ENST00000342494 HSPA14Q0VDF9 509 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 KDM7AQ6ZMT4 941 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 RIPOR1Q6ZS17 1223 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 CHPFQ8IZ52 775 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 MYLPFQ96A32 169 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 TAGLN3Q9UI15 199 aa15.26■□□□□ 0.03
UBE3B-202ENST00000342494 LRRC14BA6NHZ5 514 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 SMIM22K7EJ46 135 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 CNOT3O75175 753 aaKnown RBP15.25■□□□□ 0.03
UBE3B-202ENST00000342494 OR6A2O95222 327 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 ATP6V1B1P15313 513 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 TLX1P31314 330 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-202ENST00000342494 C16orf62Q7Z3J2 963 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 SCUBE1Q8IWY4 988 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 UTP15Q8TED0 518 aaKnown RBP15.25■□□□□ 0.03
UBE3B-202ENST00000342494 HSFY1Q96LI6 401 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 GAS2L1Q99501 681 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-202ENST00000342494 ROGDIQ9GZN7 287 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 HIPK3Q9H422 1215 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 ZNHIT2Q9UHR6 403 aa15.25■□□□□ 0.03
UBE3B-202ENST00000342494 DISP2A7MBM2 1401 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms