RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 KDM1BQ8NB78 822 aa16.94■□□□□ 0.3
NECTIN1-202ENST00000340882 PRR11Q96HE9 360 aaPredicted RBP16.94■□□□□ 0.3
NECTIN1-202ENST00000340882 APOLD1Q96LR9 279 aa16.94■□□□□ 0.3
NECTIN1-202ENST00000340882 MYOCQ99972 504 aa16.94■□□□□ 0.3
NECTIN1-202ENST00000340882 SARDHQ9UL12 918 aa16.94■□□□□ 0.3
NECTIN1-202ENST00000340882 XPO1O14980 1071 aaKnown RBP16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 CASC3O15234 703 aaKnown RBP16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 PLRG1O43660 514 aaKnown RBP16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 SRPRAP08240 638 aaKnown RBP16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 STAT4Q14765 748 aa16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 MSANTD2Q6P1R3 559 aa16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 HJURPQ8NCD3 748 aaPredicted RBP16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 UBA3Q8TBC4 463 aa16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 NUCKS1Q9H1E3 243 aaKnown RBP16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 LRRC4Q9HBW1 653 aa16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 THSD1Q9NS62 852 aa16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 ABCC13Q9NSE7 274 aa16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 TSPAN16Q9UKR8 245 aa16.93■□□□□ 0.3
NECTIN1-202ENST00000340882 PIK3R2O00459 728 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 PDXKO00764 312 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 IRAK2O43187 625 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 EFSO43281 561 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 PDCP20941 246 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 TGM2P21980 687 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 DAOAP59103 153 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 ECT2LQ008S8 904 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 KCNMA1Q12791 1236 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 OVGP1Q12889 678 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 ISXQ2M1V0 245 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 KLK6Q92876 244 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 KLHDC7BQ96G42 594 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 ATXN7L3BQ96GX2 97 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 SLC46A1Q96NT5 459 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 IPO9Q96P70 1041 aaKnown RBP16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 TPX2Q9ULW0 747 aaKnown RBP16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 DMTF1Q9Y222 760 aa16.92■□□□□ 0.3
NECTIN1-202ENST00000340882 AHCTF1Q8WYP5 2266 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 TERTO14746 1132 aaKnown RBP16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 MAGEC1O60732 1142 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 PPP6R2O75170 966 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 PIAS2O75928 621 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 NEBLO76041 1014 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 THEGLP0DJG4 465 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 PDIA4P13667 645 aaKnown RBP16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 LCP1P13796 627 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 SLC11A2P49281 568 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 TBX4P57082 545 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 CNTN1Q12860 1018 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 LINC00303Q3SY05 128 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 KMT5BQ4FZB7 885 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 AGBL4Q5VU57 503 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 TRIM69Q86WT6 500 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 TMEM145Q8NBT3 493 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 CLEC4CQ8WTT0 213 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 FCRL2Q96LA5 508 aaPredicted RBP16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 NOX5Q96PH1 765 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 MAGEF1Q9HAY2 307 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 FZD3Q9NPG1 666 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 KLHL11Q9NVR0 708 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 XPO7Q9UIA9 1087 aaKnown RBP16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 FRMD4BQ9Y2L6 1034 aa16.91■□□□□ 0.3
NECTIN1-202ENST00000340882 TEX15Q9BXT5 2789 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 TLN1Q9Y490 2541 aaKnown RBP16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 PRAMEF26H0Y7S4 382 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 CUTAO60888 179 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 LUC7L3O95232 432 aaKnown RBP16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 PRLRP16471 622 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 TAS2R38P59533 333 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 BST2Q10589 180 aaKnown RBP16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 CLN3Q13286 438 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 CDH18Q13634 790 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 ELAVL3Q14576 367 aaKnown RBP16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 ZNF542PQ5EBM4 170 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 MS4A13Q5J8X5 152 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 NUGGCQ68CJ6 796 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 IGF2-ASQ6U949 168 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 CCDC81Q6ZN84 652 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 UNC45BQ8IWX7 931 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 ZNF557Q8N988 423 aaPredicted RBP16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 FRS2Q8WU20 508 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 AZIN2Q96A70 460 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 KDM4CQ9H3R0 1056 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 CEP83Q9Y592 693 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 ENTPD2Q9Y5L3 495 aa16.9■□□□□ 0.3
NECTIN1-202ENST00000340882 CDRT15L2A8MXV6 281 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 MAPK13O15264 365 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 SLC31A1O15431 190 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 LZTS3O60299 673 aaPredicted RBP16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 GP1BAP07359 652 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 RGS7P49802 495 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 SLC8A3P57103 927 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 ARL13BQ3SXY8 428 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 SLC22A18ASQ8N1D0 253 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 SIX6OS1Q8N1H7 587 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 OR13H1Q8NG92 308 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 IFI44Q8TCB0 444 aa16.89■□□□□ 0.29
NECTIN1-202ENST00000340882 MAPK15Q8TD08 544 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms