RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 RNF103O00237 685 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 MAP2K7O14733 419 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 CHADO15335 359 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 RAMP2O60895 175 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 ADRB2P07550 413 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 FCGR1AP12314 374 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 TSHRP16473 764 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 MGAT1P26572 445 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 RAP1GDS1P52306 607 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 NCKAP1LP55160 1127 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 BTKQ06187 659 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 GALNTL6Q49A17 601 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 ETNPPLQ8TBG4 499 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 BAP1Q92560 729 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 ITM2BQ9Y287 266 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 ADGRA3Q8IWK6 1321 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 NCF1BA6NI72 391 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-201ENST00000340748 NCF1CA8MVU1 366 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-201ENST00000340748 UBDO15205 165 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 NCF1P14598 390 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-201ENST00000340748 BDNFP23560 247 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 CDH8P55286 799 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 IRX1P78414 480 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-201ENST00000340748 CHRNB3Q05901 458 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 CNTN1Q12860 1018 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 CNGA2Q16280 664 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 TMPRSS6Q8IU80 811 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 SCUBE3Q8IX30 993 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 LNX1Q8TBB1 728 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-201ENST00000340748 EDEM1Q92611 657 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 PPP1R10Q96QC0 940 aaKnown RBP13.1□□□□□ -0.31
DNMT1-201ENST00000340748 MPP6Q9NZW5 540 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 SLC27A5Q9Y2P5 690 aa13.1□□□□□ -0.31
DNMT1-201ENST00000340748 ATP9AO75110 1047 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 CSE1LP55060 971 aaKnown RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 FUT11Q495W5 492 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 PRMT9Q6P2P2 845 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 B4GALNT2Q8NHY0 566 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 E5RJQ4 531 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 E9PBE3 544 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 KLHL41O60662 606 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 HOXB8P17481 243 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 CDC25CP30307 473 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 SOX11P35716 441 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 PRIM2P49643 509 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 CPA6Q8N4T0 437 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 MREGQ8N565 214 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 KLHL4Q9C0H6 718 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 NMRAL1Q9HBL8 299 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 TCF7L2Q9NQB0 619 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 CHST7Q9NS84 486 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 ZNF229Q9UJW7 825 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 SRRM3A6NNA2 597 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 TRIM13O60858 407 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 SASH3O75995 380 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 TUBP50607 506 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 MARSP56192 900 aaKnown RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 C21orf59P57076 290 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 CSTF3Q12996 717 aaKnown RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 PARP6Q2NL67 630 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 KYAT3Q6YP21 454 aaKnown RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 PTAR1Q7Z6K3 402 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 GLIS3Q8NEA6 775 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 TISP43B9A030 160 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 EVX2Q03828 476 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 TIGD5Q53EQ6 642 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 KCNT2Q6UVM3 1135 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 CASP10Q92851 521 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 OXNAD1Q96HP4 312 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 CELF6Q96J87 481 aaKnown RBP13.09□□□□□ -0.31
DNMT1-201ENST00000340748 AASDHPPTQ9NRN7 309 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 POLG2Q9UHN1 485 aa13.09□□□□□ -0.31
DNMT1-201ENST00000340748 ERI2A8K979 691 aaKnown RBP13.08□□□□□ -0.31
DNMT1-201ENST00000340748 CBX4O00257 560 aa13.08□□□□□ -0.31
DNMT1-201ENST00000340748 ATP6V1G2O95670 118 aa13.08□□□□□ -0.31
DNMT1-201ENST00000340748 ALOX15P16050 662 aaPredicted RBP13.08□□□□□ -0.31
DNMT1-201ENST00000340748 SSTR1P30872 391 aa13.08□□□□□ -0.31
DNMT1-201ENST00000340748 POU6F1Q14863 301 aa13.08□□□□□ -0.31
DNMT1-201ENST00000340748 PHF13Q86YI8 300 aaPredicted RBP13.08□□□□□ -0.31
DNMT1-201ENST00000340748 KYQ8NBH2 561 aa13.08□□□□□ -0.31
DNMT1-201ENST00000340748 UBP1Q9NZI7 540 aa13.08□□□□□ -0.31
DNMT1-201ENST00000340748 DYRK1BQ9Y463 629 aa13.08□□□□□ -0.31
DNMT1-201ENST00000340748 ACTL7BQ9Y614 415 aa13.08□□□□□ -0.31
DNMT1-201ENST00000340748 VCLP18206 1134 aa13.08□□□□□ -0.32
DNMT1-201ENST00000340748 IFI35P80217 286 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-201ENST00000340748 PRR23BQ6ZRT6 265 aa13.08□□□□□ -0.32
DNMT1-201ENST00000340748 SPATA20Q8TB22 786 aa13.08□□□□□ -0.32
DNMT1-201ENST00000340748 BTBD10Q9BSF8 475 aa13.08□□□□□ -0.32
DNMT1-201ENST00000340748 MMADHCQ9H3L0 296 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-201ENST00000340748 CXorf56Q9H5V9 222 aa13.08□□□□□ -0.32
DNMT1-201ENST00000340748 F8VP50 259 aa13.08□□□□□ -0.32
DNMT1-201ENST00000340748 M0R3G1 203 aa13.08□□□□□ -0.32
DNMT1-201ENST00000340748 NR5A2O00482 541 aa13.08□□□□□ -0.32
DNMT1-201ENST00000340748 XPO1O14980 1071 aaKnown RBP13.08□□□□□ -0.32
DNMT1-201ENST00000340748 GABRR2P28476 465 aa13.08□□□□□ -0.32
DNMT1-201ENST00000340748 RPL9P32969 192 aaKnown RBP13.08□□□□□ -0.32
DNMT1-201ENST00000340748 TRPC1P48995 793 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms