RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ART3Q13508 389 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 FLOT2Q14254 428 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 GK3PQ14409 553 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 CYTH1Q15438 398 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 DPYSL2Q16555 572 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 FSCBQ5H9T9 825 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 FAM72AQ5TYM5 149 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 FAM72DQ6L9T8 149 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 HFE2Q6ZVN8 426 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 TMEM110Q86TL2 294 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 FAM72BQ86X60 149 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 PDSS2Q86YH6 399 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 EDEM1Q92611 657 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 RCN3Q96D15 328 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 RTP4Q96DX8 246 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 SIK2Q9H0K1 926 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 ATXN3LQ9H3M9 355 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 CDHR5Q9HBB8 845 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 VANGL2Q9ULK5 521 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 PCDHGB4Q9UN71 923 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 PCDHGB5Q9Y5G0 923 aa14.72□□□□□ -0.05
CPSF7-201ENST00000340437 SOCS7O14512 581 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 SRGAP2BP0DMP2 458 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 UQCRBP14927 111 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 ARSAP15289 507 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 PMLP29590 882 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 FDFT1P37268 417 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 ALDH1A3P47895 512 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 POU5F1BQ06416 359 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 USP10Q14694 798 aaKnown RBP14.71□□□□□ -0.05
CPSF7-201ENST00000340437 MARK2Q7KZI7 788 aaKnown RBP14.71□□□□□ -0.05
CPSF7-201ENST00000340437 FBXW8Q8N3Y1 598 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 SREK1Q8WXA9 508 aaKnown RBP14.71□□□□□ -0.05
CPSF7-201ENST00000340437 PIGNO95427 931 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 GRK2P25098 689 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 MAP3K7CLP57077 242 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 SNX16P57768 344 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 BST2Q10589 180 aaKnown RBP14.71□□□□□ -0.05
CPSF7-201ENST00000340437 LRRC8BQ6P9F7 803 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 RPS27LQ71UM5 84 aaKnown RBP14.71□□□□□ -0.05
CPSF7-201ENST00000340437 SIX6OS1Q8N1H7 587 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.71□□□□□ -0.05
CPSF7-201ENST00000340437 TRAPPC9Q96Q05 1148 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 GATA5Q9BWX5 397 aaPredicted RBP14.71□□□□□ -0.05
CPSF7-201ENST00000340437 SPATA16Q9BXB7 569 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 VCX3BQ9H321 246 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 NMRAL1Q9HBL8 299 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 RNF181Q9P0P0 153 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 KIAA1257Q9ULG3 409 aa14.71□□□□□ -0.05
CPSF7-201ENST00000340437 RUVBL2Q9Y230 463 aaKnown RBP14.71□□□□□ -0.05
CPSF7-201ENST00000340437 TMEM233B4DJY2 109 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 BEST1O76090 585 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 FGFR3P22607 806 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 EDNRBP24530 442 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 CDK7P50613 346 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 INCA1Q0VD86 236 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 GSTA3Q16772 222 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 BEST2Q8NFU1 509 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 CYP4F12Q9HCS2 524 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 GTSE1Q9NYZ3 720 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 DNAH12Q6ZR08 3092 aa14.71□□□□□ -0.06
CPSF7-201ENST00000340437 ZBTB24O43167 697 aaPredicted RBP14.7□□□□□ -0.06
CPSF7-201ENST00000340437 JCHAINP01591 159 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 RANBP1P43487 201 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 NR2C2P49116 596 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 RWDD4Q6NW29 188 aaKnown RBP14.7□□□□□ -0.06
CPSF7-201ENST00000340437 PCDH20Q8N6Y1 951 aaKnown RBP14.7□□□□□ -0.06
CPSF7-201ENST00000340437 URGCPQ8TCY9 931 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 KCTD4Q8WVF5 259 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 NPAS2Q99743 824 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 GRIP2Q9C0E4 1043 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 CDH19Q9H159 772 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 GPAMQ9HCL2 828 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 CDY2AQ9Y6F7 541 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 CDY1Q9Y6F8 540 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 CSPG5O95196 566 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 SPATA31D3P0C874 917 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 XRCC1P18887 633 aaPredicted RBP14.7□□□□□ -0.06
CPSF7-201ENST00000340437 IGFBP6P24592 240 aaPredicted RBP14.7□□□□□ -0.06
CPSF7-201ENST00000340437 GRIA2P42262 883 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 INHBEP58166 350 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 LAMB3Q13751 1172 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 NRF1Q16656 503 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 SPATA31D4Q6ZUB0 917 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 ILKAPQ9H0C8 392 aaPredicted RBP14.7□□□□□ -0.06
CPSF7-201ENST00000340437 MORF4L1Q9UBU8 362 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 SCN1AP35498 2009 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 H3BRB1 525 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 TRIM13O60858 407 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 RECQL4O94761 1208 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 IL1BP01584 269 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 CNTFP26441 200 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 MAGEA3P43357 314 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 NIPAL4Q0D2K0 466 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 CTBP1Q13363 440 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 MPP3Q13368 585 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 PDK1Q15118 436 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 C6orf52Q5T4I8 152 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 FBXL19Q6PCT2 694 aa14.7□□□□□ -0.06
CPSF7-201ENST00000340437 MPP4Q96JB8 637 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms