RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 FEM1AQ9BSK4 669 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 CD248Q9HCU0 757 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 EBF1Q9UH73 591 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 PCSK1NQ9UHG2 260 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 IP6K2Q9UHH9 426 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 RALGAPA1Q6GYQ0 2036 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 CCDC163A0A0D9SF12 145 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 AXIN1O15169 862 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 ASLP04424 464 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 RHOCP08134 193 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 TMEM253P0C7T8 217 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 HLA-EP13747 358 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 OR1E1P30953 314 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 L1CAMP32004 1257 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 SRSF5Q13243 272 aaKnown RBP15.68■□□□□ 0.1
UBE3B-201ENST00000340074 PIGHQ14442 188 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-201ENST00000340074 ACAP1Q15027 740 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 RNF219Q5W0B1 726 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-201ENST00000340074 RASSF3Q86WH2 238 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 ABCA7Q8IZY2 2146 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 ZNF366Q8N895 744 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 SPC24Q8NBT2 197 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 HMGB4Q8WW32 186 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 MYO19Q96H55 970 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 TMEM245Q9H330 911 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 GPATCH2LQ9NWQ4 482 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 CTTNBP2NLQ9P2B4 639 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 ZNF212Q9UDV6 495 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 NEU3Q9UQ49 428 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 ERVW-1Q9UQF0 538 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 MYO1FO00160 1098 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 HRO43593 1189 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 CREB3O43889 395 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 PRPSAP2O60256 369 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 EPHX1P07099 455 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 PLK1P53350 603 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 ECT2LQ008S8 904 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 STARD3Q14849 445 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 C6orf118Q5T5N4 469 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 ERMARDQ5T6L9 678 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 CYP4V2Q6ZWL3 525 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-201ENST00000340074 SETD3Q86TU7 594 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-201ENST00000340074 NIPA2Q8N8Q9 360 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 TBC1D31Q96DN5 1066 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 FAM122AQ96E09 287 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 RPL10LQ96L21 214 aaKnown RBP15.67■□□□□ 0.1
UBE3B-201ENST00000340074 MRGPRX3Q96LB0 322 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 PPP1R9BQ96SB3 815 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 NCAPGQ9BPX3 1015 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 SNRNP25Q9BV90 132 aaKnown RBP15.67■□□□□ 0.1
UBE3B-201ENST00000340074 TPSD1Q9BZJ3 242 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 MUC3BQ9H195 1237 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 BCCIPQ9P287 314 aaKnown RBP eCLIP15.67■□□□□ 0.1
UBE3B-201ENST00000340074 UVRAGQ9P2Y5 699 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 VPS28Q9UK41 221 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 USP18Q9UMW8 372 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 AP4E1Q9UPM8 1137 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 OR51B4Q9Y5P0 310 aa15.67■□□□□ 0.1
UBE3B-201ENST00000340074 A0A0D9SEW6 157 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 PROB1E7EW31 1015 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 SYNCRIPO60506 623 aaKnown RBP15.66■□□□□ 0.1
UBE3B-201ENST00000340074 SRPRAP08240 638 aaKnown RBP15.66■□□□□ 0.1
UBE3B-201ENST00000340074 TCF4P15884 667 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 RHOQP17081 205 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 GABRG2P18507 467 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 PCK1P35558 622 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 PLA2G5P39877 138 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 ST8SIA6P61647 398 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 SEMA3BQ13214 749 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 CA9Q16790 459 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 NLRP14Q86W24 1093 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 CCDC170Q8IYT3 715 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 PGBD3Q8N328 593 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 EPAS1Q99814 870 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 DHX35Q9H5Z1 703 aaKnown RBP15.66■□□□□ 0.1
UBE3B-201ENST00000340074 OSGEPQ9NPF4 335 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 NDFIP2Q9NV92 336 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 TMEM248Q9NWD8 314 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 IMPACTQ9P2X3 320 aa15.66■□□□□ 0.1
UBE3B-201ENST00000340074 SDK1Q7Z5N4 2213 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 SOWAHDA6NJG2 315 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 LCA5LO95447 670 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 NDUFV2P19404 249 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 FECHP22830 423 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 IL1R2P27930 398 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 EPHB2P29323 1055 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 CNR2P34972 360 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 STK19P49842 368 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-201ENST00000340074 SULT2A1Q06520 285 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 SMTNL2Q2TAL5 461 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-201ENST00000340074 SLC35G2Q8TBE7 412 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 PSMB7Q99436 277 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 SLC6A17Q9H1V8 727 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 DNAI1Q9UI46 699 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 SLCO3A1Q9UIG8 710 aa15.65■□□□□ 0.1
UBE3B-201ENST00000340074 ILVBLA1L0T0 632 aa15.64■□□□□ 0.09
UBE3B-201ENST00000340074 ZBTB24O43167 697 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-201ENST00000340074 RPP40O75818 363 aaKnown RBP15.64■□□□□ 0.09
UBE3B-201ENST00000340074 CYLC1P35663 651 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms