RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PCDHB2Q9Y5E7 798 aa13.06□□□□□ -0.32
USP47-202ENST00000339865 ETS1P14921 441 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 TOP3AQ13472 1001 aaPredicted RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 EPC2Q52LR7 807 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 TRPV1Q8NER1 839 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 ASB12Q8WXK4 309 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 ANKS1AQ92625 1134 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 DPF2Q92785 391 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 MYDGFQ969H8 173 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 DGCR14Q96DF8 476 aaKnown RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 MED28Q9H204 178 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 LRRC40Q9H9A6 602 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 MID1IP1Q9NPA3 183 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 DDIT4Q9NX09 232 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 IQGAP2Q13576 1575 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 H3BM21 787 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 SRGNP10124 158 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 MAD2L1Q13257 205 aaPredicted RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 GALNT3Q14435 633 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 NR1I3Q14994 352 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 TUBA3EQ6PEY2 450 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 MMADHCQ9H3L0 296 aaPredicted RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 SEC31BQ9NQW1 1179 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 USP17L10C9JJH3 530 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 CES2O00748 559 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 ZW10O43264 779 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 GAS2O43903 313 aaKnown RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 CCNB2O95067 398 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 USP11P51784 963 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 EFNA5P52803 228 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 ASCC3Q8N3C0 2202 aaKnown RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 MSH4O15457 936 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 COPZ1P61923 177 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 STILQ15468 1287 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 TNFAIP8L3Q5GJ75 292 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 CIR1Q86X95 450 aaPredicted RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 OFCC1Q8IZS5 231 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 STK32AQ8WU08 396 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 ZNF354BQ96LW1 612 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 PRRG4Q9BZD6 226 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 SENP6Q9GZR1 1112 aaPredicted RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 RGS17Q9UGC6 210 aaPredicted RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 TDP2O95551 362 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 ADSSP30520 456 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 RPL4P36578 427 aaKnown RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 CRATP43155 626 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 HIRAP54198 1017 aaPredicted RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 TRMT11Q7Z4G4 463 aaKnown RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 KBTBD8Q8NFY9 601 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 GPER1Q99527 375 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 BARHL2Q9NY43 387 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 ABCG2Q9UNQ0 655 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 UQCRBP14927 111 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 IRGCQ6NXR0 463 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 PPP1R13LQ8WUF5 828 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 ABCG4Q9H172 646 aa13.05□□□□□ -0.32
USP47-202ENST00000339865 CDC42EP4Q9H3Q1 356 aaKnown RBP13.05□□□□□ -0.32
USP47-202ENST00000339865 CASKO14936 926 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 TAF1CQ15572 869 aaPredicted RBP13.04□□□□□ -0.32
USP47-202ENST00000339865 SMU1Q2TAY7 513 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 PHF10Q8WUB8 498 aaKnown RBP13.04□□□□□ -0.32
USP47-202ENST00000339865 ZNF350Q9GZX5 532 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 EVA1BQ9NVM1 165 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 DMGDHQ9UI17 866 aaKnown RBP13.04□□□□□ -0.32
USP47-202ENST00000339865 CRTAMO95727 393 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 OGFRL1Q5TC84 451 aaPredicted RBP13.04□□□□□ -0.32
USP47-202ENST00000339865 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
USP47-202ENST00000339865 POF1BQ8WVV4 589 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 THAP1Q9NVV9 213 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 MID1O15344 667 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 TSPAN3O60637 253 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 CD4P01730 458 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 PHKG2P15735 406 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 CYP4F8P98187 520 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 OR2L3Q8NG85 312 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 CKAP2Q8WWK9 683 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 ATL1Q8WXF7 558 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 HPDLQ96IR7 371 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 ENTPD4Q9Y227 616 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 HEATR1Q9H583 2144 aaKnown RBP13.04□□□□□ -0.32
USP47-202ENST00000339865 EPORP19235 508 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 GPSM2P81274 684 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 CYB5R4Q7L1T6 521 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 CAMK1DQ8IU85 385 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 OR6J1Q8NGC5 347 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 HDAC2Q92769 488 aaKnown RBP13.04□□□□□ -0.32
USP47-202ENST00000339865 XKR8Q9H6D3 395 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 ZFYVE28Q9HCC9 887 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 ACOT9Q9Y305 439 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 MYOM2P54296 1465 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 GSAPA4D1B5 854 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 PDXKO00764 312 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 NTRK1P04629 796 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 BMP7P18075 431 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 OXCT1P55809 520 aa13.04□□□□□ -0.32
USP47-202ENST00000339865 CCZ1BP86790 482 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms