RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RABGAP1LQ5R372 815 aa15.07■□□□□ 0
CBX3-201ENST00000337620 ANKRD22Q5VYY1 191 aa15.07■□□□□ 0
CBX3-201ENST00000337620 MREGQ8N565 214 aa15.07■□□□□ 0
CBX3-201ENST00000337620 C12orf76Q8N812 135 aaPredicted RBP15.07■□□□□ 0
CBX3-201ENST00000337620 UBLCP1Q8WVY7 318 aaPredicted RBP15.07■□□□□ 0
CBX3-201ENST00000337620 SPATA13Q96N96 652 aa15.07■□□□□ 0
CBX3-201ENST00000337620 SMG9Q9H0W8 520 aaKnown RBP15.07■□□□□ 0
CBX3-201ENST00000337620 IGFLR1Q9H665 355 aa15.07■□□□□ 0
CBX3-201ENST00000337620 PIDD1Q9HB75 910 aa15.07■□□□□ 0
CBX3-201ENST00000337620 HPCAL4Q9UM19 191 aa15.07■□□□□ 0
CBX3-201ENST00000337620 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
CBX3-201ENST00000337620 DENND4CQ5VZ89 1909 aa15.06■□□□□ 0
CBX3-201ENST00000337620 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.06■□□□□ 0
CBX3-201ENST00000337620 TCRBV7S3A2A0A539 114 aa15.06■□□□□ 0
CBX3-201ENST00000337620 F5H423 210 aaPredicted RBP15.06■□□□□ 0
CBX3-201ENST00000337620 PPFIA2O75334 1257 aa15.06■□□□□ 0
CBX3-201ENST00000337620 METTL18O95568 372 aa15.06■□□□□ 0
CBX3-201ENST00000337620 BMP8BP34820 402 aa15.06■□□□□ 0
CBX3-201ENST00000337620 RPS24P62847 133 aaKnown RBP15.06■□□□□ 0
CBX3-201ENST00000337620 SLC5A9Q2M3M2 681 aa15.06■□□□□ 0
CBX3-201ENST00000337620 ARHGAP15Q53QZ3 475 aa15.06■□□□□ 0
CBX3-201ENST00000337620 C4orf22Q6V702 233 aa15.06■□□□□ 0
CBX3-201ENST00000337620 PID1Q7Z2X4 250 aa15.06■□□□□ 0
CBX3-201ENST00000337620 ZNF354CQ86Y25 554 aa15.06■□□□□ 0
CBX3-201ENST00000337620 ZNF567Q8N184 647 aa15.06■□□□□ 0
CBX3-201ENST00000337620 UMODL1-AS1Q8N2C9 162 aa15.06■□□□□ 0
CBX3-201ENST00000337620 NAT8LQ8N9F0 302 aa15.06■□□□□ 0
CBX3-201ENST00000337620 PRCCQ92733 491 aaPredicted RBP15.06■□□□□ 0
CBX3-201ENST00000337620 TIFAQ96CG3 184 aa15.06■□□□□ 0
CBX3-201ENST00000337620 DDX50Q9BQ39 737 aaKnown RBP15.06■□□□□ 0
CBX3-201ENST00000337620 TSPYL1Q9H0U9 437 aa15.06■□□□□ 0
CBX3-201ENST00000337620 NOL6Q9H6R4 1146 aaKnown RBP15.06■□□□□ 0
CBX3-201ENST00000337620 ETNK1Q9HBU6 452 aa15.06■□□□□ 0
CBX3-201ENST00000337620 CFAP97Q9P2B7 532 aa15.06■□□□□ 0
CBX3-201ENST00000337620 KLHL8Q9P2G9 620 aaPredicted RBP15.06■□□□□ 0
CBX3-201ENST00000337620 LSM7Q9UK45 103 aaKnown RBP15.06■□□□□ 0
CBX3-201ENST00000337620 SHOC2Q9UQ13 582 aa15.06■□□□□ 0
CBX3-201ENST00000337620 SH3BP1Q9Y3L3 701 aa15.06■□□□□ 0
CBX3-201ENST00000337620 DOCK4Q8N1I0 1966 aa15.06■□□□□ 0
CBX3-201ENST00000337620 MTSS1O43312 755 aa15.05■□□□□ 0
CBX3-201ENST00000337620 MOSPD3O75425 235 aa15.05■□□□□ 0
CBX3-201ENST00000337620 CCNCP24863 283 aa15.05■□□□□ 0
CBX3-201ENST00000337620 PTPN3P26045 913 aa15.05■□□□□ 0
CBX3-201ENST00000337620 HSD17B3P37058 310 aa15.05■□□□□ 0
CBX3-201ENST00000337620 AVPR1AP37288 418 aa15.05■□□□□ 0
CBX3-201ENST00000337620 NDST2P52849 883 aa15.05■□□□□ 0
CBX3-201ENST00000337620 PMS2P54278 862 aa15.05■□□□□ 0
CBX3-201ENST00000337620 SLMAPQ14BN4 828 aa15.05■□□□□ 0
CBX3-201ENST00000337620 C5orf22Q49AR2 442 aa15.05■□□□□ 0
CBX3-201ENST00000337620 AFMIDQ63HM1 303 aa15.05■□□□□ 0
CBX3-201ENST00000337620 TMC5Q6UXY8 1006 aa15.05■□□□□ 0
CBX3-201ENST00000337620 ZCCHC9Q8N567 271 aaKnown RBP15.05■□□□□ 0
CBX3-201ENST00000337620 LEMD2Q8NC56 503 aa15.05■□□□□ 0
CBX3-201ENST00000337620 ZNF707Q96C28 371 aaPredicted RBP15.05■□□□□ 0
CBX3-201ENST00000337620 PRICKLE1Q96MT3 831 aaPredicted RBP15.05■□□□□ 0
CBX3-201ENST00000337620 SHROOM3Q8TF72 1996 aa15.05■□□□□ -0
CBX3-201ENST00000337620 RASA4BC9J798 803 aa15.05■□□□□ -0
CBX3-201ENST00000337620 RASA4O43374 803 aa15.05■□□□□ -0
CBX3-201ENST00000337620 GREM1O60565 184 aa15.05■□□□□ -0
CBX3-201ENST00000337620 MAFKO60675 156 aa15.05■□□□□ -0
CBX3-201ENST00000337620 OPHN1O60890 802 aa15.05■□□□□ -0
CBX3-201ENST00000337620 ZNF189O75820 626 aaPredicted RBP15.05■□□□□ -0
CBX3-201ENST00000337620 JCHAINP01591 159 aa15.05■□□□□ -0
CBX3-201ENST00000337620 APRTP07741 180 aa15.05■□□□□ -0
CBX3-201ENST00000337620 SGSHP51688 502 aa15.05■□□□□ -0
CBX3-201ENST00000337620 FAM193AP78312 1265 aa15.05■□□□□ -0
CBX3-201ENST00000337620 GAD2Q05329 585 aa15.05■□□□□ -0
CBX3-201ENST00000337620 CFAP58Q5T655 872 aa15.05■□□□□ -0
CBX3-201ENST00000337620 MTERF4Q7Z6M4 381 aaKnown RBP15.05■□□□□ -0
CBX3-201ENST00000337620 HOOK3Q86VS8 718 aa15.05■□□□□ -0
CBX3-201ENST00000337620 CMTM8Q8IZV2 173 aa15.05■□□□□ -0
CBX3-201ENST00000337620 SMG7Q92540 1137 aaKnown RBP15.05■□□□□ -0
CBX3-201ENST00000337620 HMCESQ96FZ2 354 aa15.05■□□□□ -0
CBX3-201ENST00000337620 AGAP3Q96P47 875 aa15.05■□□□□ -0
CBX3-201ENST00000337620 TSGA13Q96PP4 275 aa15.05■□□□□ -0
CBX3-201ENST00000337620 RBM15Q96T37 977 aaKnown RBP eCLIP15.05■□□□□ -02e-7■□□□□ 8.2
CBX3-201ENST00000337620 TXLNGYQ9BZA5 131 aa15.05■□□□□ -0
CBX3-201ENST00000337620 VIPAS39Q9H9C1 493 aa15.05■□□□□ -0
CBX3-201ENST00000337620 ZNF212Q9UDV6 495 aa15.05■□□□□ -0
CBX3-201ENST00000337620 MYO9BQ13459 2157 aa15.04■□□□□ -0
CBX3-201ENST00000337620 ARHGAP42A6NI28 874 aa15.04■□□□□ -0
CBX3-201ENST00000337620 E7EVH7 732 aa15.04■□□□□ -0
CBX3-201ENST00000337620 LEFTY2O00292 366 aa15.04■□□□□ -0
CBX3-201ENST00000337620 RAMP2O60895 175 aa15.04■□□□□ -0
CBX3-201ENST00000337620 TMEM63AO94886 807 aa15.04■□□□□ -0
CBX3-201ENST00000337620 LATS1O95835 1130 aa15.04■□□□□ -0
CBX3-201ENST00000337620 PFKLP17858 780 aa15.04■□□□□ -0
CBX3-201ENST00000337620 DDX6P26196 483 aaKnown RBP eCLIP15.04■□□□□ -0
CBX3-201ENST00000337620 MAPKAPK2P49137 400 aa15.04■□□□□ -0
CBX3-201ENST00000337620 NUMBP49757 651 aa15.04■□□□□ -0
CBX3-201ENST00000337620 CDH4P55283 916 aa15.04■□□□□ -0
CBX3-201ENST00000337620 ZNF33AQ06730 810 aa15.04■□□□□ -0
CBX3-201ENST00000337620 ZBTB17Q13105 803 aa15.04■□□□□ -0
CBX3-201ENST00000337620 POLD3Q15054 466 aaPredicted RBP15.04■□□□□ -0
CBX3-201ENST00000337620 UAP1Q16222 522 aaPredicted RBP15.04■□□□□ -0
CBX3-201ENST00000337620 Q6ZNB5 142 aa15.04■□□□□ -0
CBX3-201ENST00000337620 USP33Q8TEY7 942 aa15.04■□□□□ -0
CBX3-201ENST00000337620 MRPL38Q96DV4 380 aaKnown RBP15.04■□□□□ -0
CBX3-201ENST00000337620 SEMA4AQ9H3S1 761 aa15.04■□□□□ -0
CBX3-201ENST00000337620 TASP1Q9H6P5 420 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms