RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ZNF839A8K0R7 811 aa14□□□□□ -0.17
RTN4-202ENST00000337526 GUCA1CO95843 209 aa14□□□□□ -0.17
RTN4-202ENST00000337526 NFICP08651 508 aa14□□□□□ -0.17
RTN4-202ENST00000337526 USP17L7P0C7H9 530 aa14□□□□□ -0.17
RTN4-202ENST00000337526 TGFB2P61812 414 aa14□□□□□ -0.17
RTN4-202ENST00000337526 NRF1Q16656 503 aa14□□□□□ -0.17
RTN4-202ENST00000337526 ZNF410Q86VK4 478 aa14□□□□□ -0.17
RTN4-202ENST00000337526 TBL1YQ9BQ87 522 aa14□□□□□ -0.17
RTN4-202ENST00000337526 FBXO44Q9H4M3 255 aa14□□□□□ -0.17
RTN4-202ENST00000337526 PRDM12Q9H4Q4 367 aa14□□□□□ -0.17
RTN4-202ENST00000337526 RERGLQ9H628 205 aa14□□□□□ -0.17
RTN4-202ENST00000337526 PACSIN3Q9UKS6 424 aa14□□□□□ -0.17
RTN4-202ENST00000337526 CRYL1Q9Y2S2 319 aa14□□□□□ -0.17
RTN4-202ENST00000337526 C1orf232A0A0U1RR37 186 aa14□□□□□ -0.17
RTN4-202ENST00000337526 H7C4K7 107 aa14□□□□□ -0.17
RTN4-202ENST00000337526 NKRFO15226 690 aaKnown RBP eCLIP14□□□□□ -0.17
RTN4-202ENST00000337526 LZTS3O60299 673 aaPredicted RBP14□□□□□ -0.17
RTN4-202ENST00000337526 CCNT2O60583 730 aaKnown RBP14□□□□□ -0.17
RTN4-202ENST00000337526 MLNP12872 115 aa14□□□□□ -0.17
RTN4-202ENST00000337526 EPB42P16452 691 aa14□□□□□ -0.17
RTN4-202ENST00000337526 FAM183BPQ6ZVS7 135 aa14□□□□□ -0.17
RTN4-202ENST00000337526 NET1Q7Z628 596 aaPredicted RBP14□□□□□ -0.17
RTN4-202ENST00000337526 MRPS31Q92665 395 aaKnown RBP14□□□□□ -0.17
RTN4-202ENST00000337526 HSFY1Q96LI6 401 aa14□□□□□ -0.17
RTN4-202ENST00000337526 SERPINB11Q96P15 392 aa14□□□□□ -0.17
RTN4-202ENST00000337526 GIMAP4Q9NUV9 329 aa14□□□□□ -0.17
RTN4-202ENST00000337526 TNFSF13BQ9Y275 285 aa14□□□□□ -0.17
RTN4-202ENST00000337526 PPP2R3BQ9Y5P8 575 aa14□□□□□ -0.17
RTN4-202ENST00000337526 CXCL11O14625 94 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 CNOT3O75175 753 aaKnown RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 ZMPSTE24O75844 475 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 PSMB9P28065 219 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 TNFSF9P41273 254 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 ZNF135P52742 658 aaPredicted RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 SWT1Q5T5J6 900 aaKnown RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 DNAJC14Q6Y2X3 702 aaPredicted RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 C11orf74Q86VG3 221 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 BHLHE22Q8NFJ8 381 aaPredicted RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 ACMSDQ8TDX5 336 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 KLHL25Q9H0H3 589 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 RNPEPQ9H4A4 650 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 A0A087WXM4 84 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 RRM2P31350 389 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 CNTN1Q12860 1018 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 CAPSQ13938 189 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 LLGL2Q6P1M3 1020 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 C12orf56Q8IXR9 622 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 C9orf16Q9BUW7 83 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 ABHD16BQ9H3Z7 469 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 PRDM16Q9HAZ2 1276 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 LIMD1Q9UGP4 676 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 VAV3Q9UKW4 847 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 PCDHAC2Q9Y5I4 1007 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 CCDC154A6NI56 674 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 GPC1P35052 558 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 BNIPLQ7Z465 357 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 TADA1Q96BN2 335 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 LRRC4CQ9HCJ2 640 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 BTBD7Q9P203 1132 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 RABGEF1Q9UJ41 708 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 C2CD2Q9Y426 696 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 DDX3YO15523 660 aaKnown RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 EGFRP00533 1210 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 HOXB8P17481 243 aaPredicted RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 ITGB6P18564 788 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 LRPAP1P30533 357 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 PSMD7P51665 324 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 KPNA1P52294 538 aaPredicted RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 NCKAP1LP55160 1127 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 TRAF7Q6Q0C0 670 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 OR56A4Q8NGH8 313 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 TTYH3Q9C0H2 523 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 CDT1Q9H211 546 aa13.99□□□□□ -0.17
RTN4-202ENST00000337526 TLR8Q9NR97 1041 aaKnown RBP13.99□□□□□ -0.17
RTN4-202ENST00000337526 PEX1O43933 1283 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 RASSF9O75901 435 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 HSMCR30P0CW71 290 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 IMPDH2P12268 514 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 SOX6P35712 828 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 KIAA0319LQ8IZA0 1049 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 MFSD14AQ96MC6 490 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ASB2Q96Q27 587 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 GRIP2Q9C0E4 1043 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 MAN1C1Q9NR34 630 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 NUDT5Q9UKK9 219 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 RPL26L1Q9UNX3 145 aaKnown RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 NFASCO94856 1347 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 C15orf38-AP3S2A0A0A6YYH1 394 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 TMEM191CA6NGB0 347 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 PTGES3LE9PB15 166 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 PRR23D1E9PI22 279 aaPredicted RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 LRG1P02750 347 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 PRR23D2P0DMB1 279 aaPredicted RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 PTPRAP18433 802 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ATP4AP20648 1035 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 BDNFP23560 247 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 TP53BP2Q13625 1128 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ZC3H12AQ5D1E8 599 aaKnown RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 PCID2Q5JVF3 399 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms