RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SERPINB6P35237 376 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 ABCG1P45844 678 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 RAB27AP51159 221 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 CACNB2Q08289 660 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 TUSC3Q13454 348 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 DSC3Q14574 896 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 SPANXN3Q5MJ09 141 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 KYAT3Q6YP21 454 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 ARHGAP36Q6ZRI8 547 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 CCDC91Q7Z6B0 441 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 RPAINQ86UA6 219 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 USP33Q8TEY7 942 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 RSPH1Q8WYR4 309 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 IRGQQ8WZA9 623 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 AGAP2Q99490 1192 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 ARHGAP42A6NI28 874 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 M0QZQ0 153 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 LYPLA1O75608 230 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 GM2AP17900 193 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 CCND3P30281 292 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 GP5P40197 560 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 AQP5P55064 265 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 INHBEP58166 350 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 PRKCZQ05513 592 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 GRIK3Q13003 919 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 STX3Q13277 289 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 NAB1Q13506 487 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 CRLF3Q8IUI8 442 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 PPP1R14CQ8TAE6 165 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 ACMSDQ8TDX5 336 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 CASS4Q9NQ75 786 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 KCNK4Q9NYG8 393 aa15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 HBS1LQ9Y450 684 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-201ENST00000331433 ZCWPW2A0A1B0GU75 182 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 CCDC78A2IDD5 438 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 DFFAO00273 331 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 MSI1O43347 362 aaKnown RBP15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 PLIN3O60664 434 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 GLRA3O75311 464 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 OR4Q2P0C623 313 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 CCND1P24385 295 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 TYK2P29597 1187 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 FCGRTP55899 365 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 DCLRE1AQ6PJP8 1040 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 OTOP3Q7RTS5 596 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 ZSCAN18Q8TBC5 510 aaPredicted RBP15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 NSL1Q96IY1 281 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 CHRAC1Q9NRG0 131 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 ZNF358Q9NW07 568 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 SFMBT1Q9UHJ3 866 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 NUDT5Q9UKK9 219 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 BPTFQ12830 3046 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 PTPRDP23468 1912 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 FAM155AB1AL88 458 aaPredicted RBP15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 MTSS1O43312 755 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 ITM2AO43736 263 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 B4GALT3O60512 393 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 ANP32DO95626 131 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 PRKCGP05129 697 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 ANKRD20A4Q4UJ75 823 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 HSP90AA5PQ58FG0 334 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 MBLAC2Q68D91 279 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 ITPRIPL1Q6GPH6 555 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 STRA8Q7Z7C7 330 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 TMEM135Q86UB9 458 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 RAB3IL1Q8TBN0 382 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 DPF3Q92784 378 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 ATP2A3Q93084 1043 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 TEKT5Q96M29 485 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 CPNE1Q99829 537 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 CADM1Q9BY67 442 aaKnown RBP15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 BRD8Q9H0E9 1235 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 TRHDEQ9UKU6 1024 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 NEU3Q9UQ49 428 aa15.19■□□□□ 0.02
CLCNKA-201ENST00000331433 GOLGA8TH3BQL2 631 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 FGF3P11487 239 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 SLC5A3P53794 718 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 CAP1Q01518 475 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 PCLAFQ15004 111 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 DCLK2Q8N568 766 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 CNTD1Q8N815 330 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 SNX15Q9NRS6 342 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 THAP1Q9NVV9 213 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 TMEM216Q9P0N5 145 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 PPARGC1AQ9UBK2 798 aaKnown RBP15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 NKX1-2Q9UD57 310 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 DSEQ9UL01 958 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 NOD1Q9Y239 953 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 NLRC5Q86WI3 1866 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 CCDC22O60826 627 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 USP1O94782 785 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 IGLV3-25P01717 112 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 GRIK1P39086 918 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 TSPY1Q01534 308 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 C10orf107Q8IVU9 208 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 ZNF419Q96HQ0 510 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 RBBP8Q99708 897 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 EBF4Q9BQW3 602 aa15.18■□□□□ 0.02
CLCNKA-201ENST00000331433 TLE6Q9H808 572 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms