RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PDP2Q9P2J9 529 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 PCDHB12Q9Y5F1 795 aa15.72■□□□□ 0.11
BRCC3-201ENST00000330045 M0QYT0 321 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 KCNK1O00180 336 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 EEF2KO00418 725 aaKnown RBP15.71■□□□□ 0.11
BRCC3-201ENST00000330045 LYNP07948 512 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 MAGEA12P43365 314 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 SERPINB8P50452 374 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 RAPH1Q70E73 1250 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 STRA8Q7Z7C7 330 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 TNS4Q8IZW8 715 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 PLD6Q8N2A8 252 aaKnown RBP15.71■□□□□ 0.11
BRCC3-201ENST00000330045 SLC26A7Q8TE54 656 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 NT5C3BQ969T7 300 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 ISL2Q96A47 359 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 ZNF669Q96BR6 464 aaPredicted RBP15.71■□□□□ 0.11
BRCC3-201ENST00000330045 ATXN7L3BQ96GX2 97 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 TNIP3Q96KP6 325 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 ZNF560Q96MR9 790 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 AGAP3Q96P47 875 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 NPY6RQ99463 290 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 TINF2Q9BSI4 451 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 CDHR5Q9HBB8 845 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 CYP4F11Q9HBI6 524 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 SETD4Q9NVD3 440 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 KLHL8Q9P2G9 620 aaPredicted RBP15.71■□□□□ 0.11
BRCC3-201ENST00000330045 CDH22Q9UJ99 828 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 CDY2AQ9Y6F7 541 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 CDY1Q9Y6F8 540 aa15.71■□□□□ 0.11
BRCC3-201ENST00000330045 PDCD11Q14690 1871 aaKnown RBP15.71■□□□□ 0.11
BRCC3-201ENST00000330045 LOC100653049A0A140TA62 436 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.71■□□□□ 0.1
BRCC3-201ENST00000330045 KRT34O76011 436 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 PDE5AO76074 875 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 BTKQ06187 659 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 ASPHQ12797 758 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 NME3Q13232 169 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 DPYSQ14117 519 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 TAF1CQ15572 869 aaPredicted RBP15.71■□□□□ 0.1
BRCC3-201ENST00000330045 FSTL4Q6MZW2 842 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 SLC30A9Q6PML9 568 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 BNIPLQ7Z465 357 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 DHDDSQ86SQ9 333 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.71■□□□□ 0.1
BRCC3-201ENST00000330045 TRAPPC9Q96Q05 1148 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 COG4Q9H9E3 785 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 PIDD1Q9HB75 910 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 STAP1Q9ULZ2 295 aa15.71■□□□□ 0.1
BRCC3-201ENST00000330045 SMIM28A0A1B0GU29 152 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 DCLK1O15075 740 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 USP12O75317 370 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 GPR32O75388 356 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 SORBS2O94875 1100 aaKnown RBP15.7■□□□□ 0.1
BRCC3-201ENST00000330045 GNAT1P11488 350 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 PNPLA4P41247 253 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 LIMK2P53671 638 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 USP4Q13107 963 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 CCNIQ14094 377 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 FSCBQ5H9T9 825 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 CFAP157Q5JU67 520 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 DEFB107AQ8IZN7 70 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 PHTF2Q8N3S3 785 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 JADE3Q92613 823 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 PPP2R3CQ969Q6 453 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 OSMRQ99650 979 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 DDX50Q9BQ39 737 aaKnown RBP15.7■□□□□ 0.1
BRCC3-201ENST00000330045 DUSP16Q9BY84 665 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 PAPOLBQ9NRJ5 636 aaKnown RBP15.7■□□□□ 0.1
BRCC3-201ENST00000330045 BFARQ9NZS9 450 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 KLK14Q9P0G3 267 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 VANGL2Q9ULK5 521 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 ZNF638Q14966 1978 aaKnown RBP15.7■□□□□ 0.1
BRCC3-201ENST00000330045 EME2A4GXA9 379 aaPredicted RBP15.7■□□□□ 0.1
BRCC3-201ENST00000330045 DCXO43602 365 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 HUS1O60921 280 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 HSPA4LO95757 839 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 AP2A1O95782 977 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 ZCCHC18P0CG32 403 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 ITGAXP20702 1163 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 CTGFP29279 349 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 NDUFV1P49821 464 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 TAF6P49848 677 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 SYPL2Q5VXT5 272 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 FOXB2Q5VYV0 432 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 FRMD7Q6ZUT3 714 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 TMEM135Q86UB9 458 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 ZNF781Q8N8C0 355 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 DNAAF3Q8N9W5 541 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 B3GALNT2Q8NCR0 500 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 AZIN2Q96A70 460 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 CCDC124Q96CT7 223 aaKnown RBP15.7■□□□□ 0.1
BRCC3-201ENST00000330045 AGAP2Q99490 1192 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 HNRNPABQ99729 332 aaKnown RBP15.7■□□□□ 0.1
BRCC3-201ENST00000330045 OXCT2Q9BYC2 517 aaPredicted RBP15.7■□□□□ 0.1
BRCC3-201ENST00000330045 CDH19Q9H159 772 aa15.7■□□□□ 0.1
BRCC3-201ENST00000330045 CLDN5O00501 218 aa15.69■□□□□ 0.1
BRCC3-201ENST00000330045 PTPN3P26045 913 aa15.69■□□□□ 0.1
BRCC3-201ENST00000330045 PAPOLAP51003 745 aaKnown RBP15.69■□□□□ 0.1
BRCC3-201ENST00000330045 CUL3Q13618 768 aa15.69■□□□□ 0.1
BRCC3-201ENST00000330045 EPGNQ6UW88 154 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms