RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ARSEP51690 589 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 CAV1Q03135 178 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 BTBD8Q5XKL5 378 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 DUPD1Q68J44 220 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 TRNP1Q6NT89 227 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 TSSK4Q6SA08 328 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 ADAT2Q7Z6V5 191 aaKnown RBP16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 DDX42Q86XP3 938 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 DEFB106AQ8N104 65 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 RAPGEF5Q92565 580 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 PCSK1NQ9UHG2 260 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 CFAP54Q96N23 3096 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 SLC12A8A0AV02 714 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 TTI1O43156 1089 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 GRAP2O75791 330 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 RDXP35241 583 aaKnown RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 HDAC4P56524 1084 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 PITX1P78337 314 aaPredicted RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 ATP11AP98196 1134 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 KRT81Q14533 505 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 DPYSL2Q16555 572 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 C15orf59Q2T9L4 293 aaPredicted RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 ATP13A4Q4VNC1 1196 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 SYPL2Q5VXT5 272 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 NAT16Q8N8M0 369 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 CCDC89Q8N998 374 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 NKD2Q969F2 451 aaPredicted RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 P2RY13Q9BPV8 354 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 CHRDQ9H2X0 955 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 SPATA6Q9NWH7 488 aaPredicted RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 NAALADL1Q9UQQ1 740 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 EP300Q09472 2414 aaPredicted RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 APOC4-APOC2K7ER74 178 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 MAP2K7O14733 419 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 NFATC1O95644 943 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 APOC2P02655 101 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 ITGAVP06756 1048 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 TCF4P15884 667 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 CDH6P55285 790 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 PTK6Q13882 451 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 BYSLQ13895 437 aaKnown RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 PPP1R7Q15435 360 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 ARL13BQ3SXY8 428 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 DCAF6Q58WW2 860 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 SPDYCQ5MJ68 293 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 DAB2IPQ5VWQ8 1189 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 SCYL2Q6P3W7 929 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 CEP128Q6ZU80 1094 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 SND1Q7KZF4 910 aaKnown RBP eCLIP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 BZW1Q7L1Q6 419 aaKnown RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 MREGQ8N565 214 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 KIAA1958Q8N8K9 716 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 NTAN1Q96AB6 310 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 LRRC45Q96CN5 670 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 FAF2Q96CS3 445 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 HEMGNQ9BXL5 484 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 FUT8Q9BYC5 575 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 KCNH6Q9H252 994 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 SPHK2Q9NRA0 654 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 ABCC13Q9NSE7 274 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 WHRNQ9P202 907 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 TBC1D14Q9P2M4 693 aa16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 AGO1Q9UL18 857 aaKnown RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 ARIH1Q9Y4X5 557 aaPredicted RBP16.93■□□□□ 0.3
PDLIM1-201ENST00000329399 TCRBV7S2A1N4TA0A589 114 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 SLC9A3R1O14745 358 aaPredicted RBP16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 LIASO43766 372 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 ITIH2P19823 946 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 TGM2P21980 687 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 CORO1AP31146 461 aaKnown RBP16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 SULT1E1P49888 294 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 NUBP1P53384 320 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 CDO1Q16878 200 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 TXNRD3NBQ6F5E7 133 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 TPGS1Q6ZTW0 290 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 CYP4V2Q6ZWL3 525 aaPredicted RBP16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 DENND1CQ8IV53 801 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 ADAM32Q8TC27 787 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 CASKIN2Q8WXE0 1202 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 IFT81Q8WYA0 676 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 HSPH1Q92598 858 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 BHMTQ93088 406 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 MSANTD3Q96H12 275 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 RNF157Q96PX1 679 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 ZNF446Q9NWS9 450 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 PLK2Q9NYY3 685 aa16.92■□□□□ 0.3
PDLIM1-201ENST00000329399 PTPRZ1P23471 2315 aaPredicted RBP16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 MYO18AQ92614 2054 aaKnown RBP16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 K7EQS6 105 aa16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 NCAM2O15394 837 aa16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 CST8O60676 142 aa16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 SP9P0CG40 484 aa16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 CHRM1P11229 460 aaPredicted RBP16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 ADH5P11766 374 aa16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 NR2C2P49116 596 aa16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 CARSP49589 748 aaKnown RBP16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 PTPN5P54829 565 aa16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 COG7P83436 770 aa16.91■□□□□ 0.3
PDLIM1-201ENST00000329399 SATB1Q01826 763 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms