RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SLC5A5Q92911 643 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 YME1L1Q96TA2 773 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 RUSC1Q9BVN2 902 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 COQ10BQ9H8M1 238 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 POLR1BQ9H9Y6 1135 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 SCPEP1Q9HB40 452 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 SLC24A2Q9UI40 661 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF229Q9UJW7 825 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 ASTN2O75129 1339 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-201ENST00000328923 ATP6V1G2-DDX39BF2Z307 99 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 I3L4J1 428 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 DYRK3O43781 588 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 PPP1R11O60927 126 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-201ENST00000328923 USP12O75317 370 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 GCATO75600 419 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 PRLP01236 227 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 IL1BP01584 269 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 FGFR3P22607 806 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 SERPINB1P30740 379 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 PTPN9P43378 593 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 RAD23AP54725 363 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 PSMC6P62333 389 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 SNTA1Q13424 505 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 LLGL2Q6P1M3 1020 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 UNC5AQ6ZN44 842 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 STXBP4Q6ZWJ1 553 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 DGLUCYQ7Z3D6 616 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 SLC9A9Q8IVB4 645 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 ABHD11Q8NFV4 315 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 MZB1Q8WU39 189 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 TFB1MQ8WVM0 346 aaKnown RBP12.1□□□□□ -0.47
SHMT2-201ENST00000328923 HDAC2Q92769 488 aaKnown RBP12.1□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF597Q96LX8 424 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 HERPUD2Q9BSE4 406 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 SEMA6AQ9H2E6 1030 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 ATP13A2Q9NQ11 1180 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 SLX4Q8IY92 1834 aa12.1□□□□□ -0.47
SHMT2-201ENST00000328923 G3V3G9 751 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 NOL3O60936 208 aaKnown RBP12.09□□□□□ -0.47
SHMT2-201ENST00000328923 LRRN2O75325 713 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 PEX14O75381 377 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 MFN2O95140 757 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 CCNCP24863 283 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ARNTP27540 789 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 PKLRP30613 574 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 SLC9A3P48764 834 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 C1QTNF8P60827 252 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF543Q08ER8 600 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 BFSP1Q12934 665 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ABCB5Q2M3G0 1257 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 RSBN1Q5VWQ0 802 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-201ENST00000328923 BNC2Q6ZN30 1099 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-201ENST00000328923 AGMOQ6ZNB7 445 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 FRMD7Q6ZUT3 714 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 CAND1Q86VP6 1230 aaKnown RBP12.09□□□□□ -0.47
SHMT2-201ENST00000328923 TMEM102Q8N9M5 508 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-201ENST00000328923 HTRA1Q92743 480 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 EHMT1Q9H9B1 1298 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 PARVAQ9NVD7 372 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ADPRHL2Q9NX46 363 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 CNTN3Q9P232 1028 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 NOCTQ9UK39 431 aaKnown RBP12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ITGA11Q9UKX5 1188 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ADAMTSL1Q8N6G6 1762 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ATRNL1Q5VV63 1379 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 FADS2P1A8MWK0 482 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 TK2O00142 265 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 EML1O00423 815 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 YBX3P16989 372 aaKnown RBP eCLIP12.09□□□□□ -0.477e-8■□□□□ 9
SHMT2-201ENST00000328923 MATN1P21941 496 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 GPLD1P80108 840 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 TMPRSS15P98073 1019 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 KCNA1Q09470 495 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 FCHO2Q0JRZ9 810 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 CETN1Q12798 172 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 SMARCB1Q12824 385 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 AP3B2Q13367 1082 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 PICALMQ13492 652 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ATG16L1Q676U5 607 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 STYK1Q6J9G0 422 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ADAMTSL2Q86TH1 951 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 EPS8L1Q8TE68 723 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 CRYGNQ8WXF5 182 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 TBCBQ99426 244 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 TMEM121Q9BTD3 319 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 MKRN2Q9H000 416 aaKnown RBP12.09□□□□□ -0.47
SHMT2-201ENST00000328923 ATP13A3Q9H7F0 1226 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 SYTL2Q9HCH5 934 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 WASH6PQ9NQA3 447 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 MTMR4Q9NYA4 1195 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 NXF1Q9UBU9 619 aaKnown RBP12.09□□□□□ -0.47
SHMT2-201ENST00000328923 FETUBQ9UGM5 382 aa12.09□□□□□ -0.47
SHMT2-201ENST00000328923 FAM25EA8MYX2 175 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 ZBTB5O15062 677 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 RNASEH2AO75792 299 aaKnown RBP12.08□□□□□ -0.48
SHMT2-201ENST00000328923 CAPNS1P04632 268 aa12.08□□□□□ -0.48
SHMT2-201ENST00000328923 ASNSP08243 561 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms