RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PCBP1Q15365 356 aaKnown RBP eCLIP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 ATP13A4Q4VNC1 1196 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 CYP4V2Q6ZWL3 525 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 MYLPFQ96A32 169 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 PLEKHG4BQ96PX9 1271 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 ROGDIQ9GZN7 287 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 RXFP1Q9HBX9 757 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 TRPM5Q9NZQ8 1165 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 CYP2C9P11712 490 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 CAPGP40121 348 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 OR6J1Q8NGC5 347 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 BSNDQ8WZ55 320 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 QPCTLQ9NXS2 382 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 ESYT3A0FGR9 886 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 MUSKO15146 869 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 CCNE2O96020 404 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 COX4I1P13073 169 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 TRAF2Q12933 501 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 CLVS1Q8IUQ0 354 aaPredicted RBP9.9□□□□□ -0.83
COL12A1-201ENST00000322507 AIFM3Q96NN9 605 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF717Q9BY31 904 aaPredicted RBP9.9□□□□□ -0.83
COL12A1-201ENST00000322507 CYP3A43Q9HB55 503 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 SHOC2Q9UQ13 582 aa9.9□□□□□ -0.83
COL12A1-201ENST00000322507 KBTBD13C9JR72 458 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 OIP5O43482 229 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 GUCY1A2P33402 732 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 HIRAP54198 1017 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF438Q7Z4V0 828 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 TBCBQ99426 244 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 NDNQ99608 321 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 GPR63Q9BZJ6 419 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 CD3EAPO15446 510 aaKnown RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 RENBPP51606 427 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 BRMS1LQ5PSV4 323 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 ANO7Q6IWH7 933 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 DLG3Q92796 817 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 REEP2Q9BRK0 252 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 EPB41L1Q9H4G0 881 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 CCDC86Q9H6F5 360 aaKnown RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 CATSPERZQ9NTU4 200 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 CDH7Q9ULB5 785 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 ZNRF3Q9ULT6 936 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 PPRC1Q5VV67 1664 aaKnown RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 ANXA6P08133 673 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 YWHAQP27348 245 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 SLC34A1Q06495 639 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 BROXQ5VW32 411 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 SRBD1Q8N5C6 995 aaKnown RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 ZSWIM1Q9BR11 485 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 HSBP1L1C9JCN9 74 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 TPPPO94811 219 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 ATF7IP2Q5U623 682 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 NSUN4Q96CB9 384 aaKnown RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 INPPL1O15357 1258 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 KHDRBS3O75525 346 aaKnown RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 NPTXRO95502 500 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 HPDLQ96IR7 371 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 MCCC1Q96RQ3 725 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 GFOD1Q9NXC2 390 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 BCAT1P54687 386 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 CMTM6Q9NX76 183 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 CNOT7Q9UIV1 285 aaKnown RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 FAM47E-STBD1D6RA91 191 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 LARGE1O95461 756 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 RBP3P10745 1247 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF211Q13398 564 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF512Q96ME7 567 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 GAL3ST1Q99999 423 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 CSF1RP07333 972 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 WEE2P0C1S8 567 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 TXNP10599 105 aaKnown RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 IL32P24001 234 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 LLGL1Q15334 1064 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 DENND1BQ6P3S1 775 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 TPCN2Q8NHX9 752 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 WDR41Q9HAD4 459 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 IGKV5-2P06315 115 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 CAVIN3Q969G5 261 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 ZCCHC2Q9C0B9 1178 aaKnown RBP9.89□□□□□ -0.83
COL12A1-201ENST00000322507 RGS18Q9NS28 235 aa9.89□□□□□ -0.83
COL12A1-201ENST00000322507 FER1L4A9Z1Z3 1794 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 DEFA6Q01524 100 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 POU5F1Q01860 360 aaKnown RBP9.88□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF45Q02386 682 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 SREBF2Q12772 1141 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 CNDP2Q96KP4 475 aaKnown RBP9.88□□□□□ -0.83
COL12A1-201ENST00000322507 LRRC40Q9H9A6 602 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 PDGFCQ9NRA1 345 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 LNPEPQ9UIQ6 1025 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 MAGEA3P43357 314 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 ALDH3A2P51648 485 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 CSNK2BP67870 215 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 SLC29A2Q14542 456 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 SLC39A1Q9NY26 324 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 RNASEH1O60930 286 aaKnown RBP9.88□□□□□ -0.83
COL12A1-201ENST00000322507 STAG3L1P0CL83 205 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 NAMPTP43490 491 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 GSSP48637 474 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 MLXIPLQ9NP71 852 aa9.88□□□□□ -0.83
COL12A1-201ENST00000322507 J3QR89 54 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms