RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 RPLP2P05387 115 aaKnown RBP22.86■■□□□ 1.25
PNKP-201ENST00000322344 ODC1P11926 461 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 RAP1GDS1P52306 607 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 RABGGTBP53611 331 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 LIMK2P53671 638 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 COG7P83436 770 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 TAF1CQ15572 869 aaPredicted RBP22.86■■□□□ 1.25
PNKP-201ENST00000322344 PM20D1Q6GTS8 502 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 DCLRE1AQ6PJP8 1040 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 TREML1Q86YW5 311 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 C3orf58Q8NDZ4 430 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 KCNV2Q8TDN2 545 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 TKTL2Q9H0I9 626 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 SNX15Q9NRS6 342 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 TMEM30AQ9NV96 361 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 STOML1Q9UBI4 398 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 OR12D3Q9UGF7 316 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 DNAJC16Q9Y2G8 782 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 SRCAPQ6ZRS2 3230 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 DUSP11O75319 330 aaKnown RBP22.86■■□□□ 1.25
PNKP-201ENST00000322344 MPOP05164 745 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 ENO1P06733 434 aaKnown RBP22.86■■□□□ 1.25
PNKP-201ENST00000322344 CYP2C18P33260 490 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 CD68P34810 354 aaPredicted RBP22.86■■□□□ 1.25
PNKP-201ENST00000322344 PGM1P36871 562 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 PRPSAP1Q14558 356 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 TAF11Q15544 211 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 DNAL1Q4LDG9 190 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 ANKRD20A4Q4UJ75 823 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 CMPK2Q5EBM0 449 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 CES3Q6UWW8 571 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 MRPL10Q7Z7H8 261 aaKnown RBP22.86■■□□□ 1.25
PNKP-201ENST00000322344 METTL23Q86XA0 190 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 DCLK2Q8N568 766 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 SENP6Q9GZR1 1112 aaPredicted RBP22.86■■□□□ 1.25
PNKP-201ENST00000322344 COPG2Q9UBF2 871 aa22.86■■□□□ 1.25
PNKP-201ENST00000322344 ZCWPW2A0A1B0GU75 182 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 PAX3P23760 479 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 GCKP35557 465 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 SCNN1GP51170 649 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 CSE1LP55060 971 aaKnown RBP22.85■■□□□ 1.25
PNKP-201ENST00000322344 UPP1Q16831 310 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 KHDC1Q4VXA5 237 aaKnown RBP22.85■■□□□ 1.25
PNKP-201ENST00000322344 BEND5Q7L4P6 421 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 STRA8Q7Z7C7 330 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 MYLPFQ96A32 169 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 ACBD6Q9BR61 282 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 MLPHQ9BV36 600 aaPredicted RBP22.85■■□□□ 1.25
PNKP-201ENST00000322344 IL22Q9GZX6 179 aa22.85■■□□□ 1.25
PNKP-201ENST00000322344 GPR182O15218 404 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 LUC7L3O95232 432 aaKnown RBP22.84■■□□□ 1.25
PNKP-201ENST00000322344 AMHP03971 560 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 PRKCGP05129 697 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 C6orf222P0C671 652 aaPredicted RBP22.84■■□□□ 1.25
PNKP-201ENST00000322344 KCNA4P22459 653 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 TIGD5Q53EQ6 642 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 AGMOQ6ZNB7 445 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 C10orf107Q8IVU9 208 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 LPPQ93052 612 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 TEKT5Q96M29 485 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 OSBPL2Q9H1P3 480 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 TMEM216Q9P0N5 145 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 TIMM44O43615 452 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 ITM2AO43736 263 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 USP12O75317 370 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 LRIG2O94898 1065 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 MYL4P12829 197 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 AOC1P19801 751 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 NFKB1P19838 968 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 ALDH18A1P54886 795 aaKnown RBP22.84■■□□□ 1.25
PNKP-201ENST00000322344 ZBTB17Q13105 803 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 KPNB1Q14974 876 aaKnown RBP22.84■■□□□ 1.25
PNKP-201ENST00000322344 PPM1JQ5JR12 505 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 NAPEPLDQ6IQ20 393 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 FAM171BQ6P995 826 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 C17orf99Q6UX52 265 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 GPATCH11Q8N954 259 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 EDEM1Q92611 657 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 C1orf21Q9H246 121 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 DNAJC28Q9NX36 388 aa22.84■■□□□ 1.25
PNKP-201ENST00000322344 APOBEC2Q9Y235 224 aaKnown RBP22.84■■□□□ 1.25
PNKP-201ENST00000322344 COL4A4P53420 1690 aaPredicted RBP22.83■■□□□ 1.25
PNKP-201ENST00000322344 MANSC4A6NHS7 340 aaPredicted RBP22.83■■□□□ 1.25
PNKP-201ENST00000322344 CASTOR2A6NHX0 329 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 ARHGAP42A6NI28 874 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 H0Y3Z8 333 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 LYPLA1O75608 230 aaPredicted RBP22.83■■□□□ 1.25
PNKP-201ENST00000322344 KLHL2O95198 593 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 CYP11A1P05108 521 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 RALBP11234 206 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 CPA3P15088 417 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 PTDSS1P48651 473 aaKnown RBP22.83■■□□□ 1.25
PNKP-201ENST00000322344 AFF1P51825 1210 aaKnown RBP22.83■■□□□ 1.25
PNKP-201ENST00000322344 LINC00523Q86TU6 105 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 NAF1Q96HR8 494 aaKnown RBP22.83■■□□□ 1.25
PNKP-201ENST00000322344 ZNF778Q96MU6 729 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 TSGA13Q96PP4 275 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 NSMCE4AQ9NXX6 385 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 DSEQ9UL01 958 aa22.83■■□□□ 1.25
PNKP-201ENST00000322344 SOX13Q9UN79 622 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms