RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TLK2Q86UE8 772 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 DDI1Q8WTU0 396 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 RPRD1AQ96P16 312 aaPredicted RBP15.57■□□□□ 0.08
VARS2-201ENST00000321897 TKTL2Q9H0I9 626 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 NT5MQ9NPB1 228 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 ADAMTSL3P82987 1691 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.57■□□□□ 0.08
VARS2-201ENST00000321897 PLA2G6O60733 806 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 ALADP13716 330 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 CCDC15Q0P6D6 951 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 PTK2BQ14289 1009 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 NANOGNBQ7Z5D8 188 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 PLEKHH3Q7Z736 793 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 GPC2Q8N158 579 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 PLD5Q8N7P1 536 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 GFM2Q969S9 779 aaKnown RBP15.57■□□□□ 0.08
VARS2-201ENST00000321897 RBM22Q9NW64 420 aaKnown RBP eCLIP15.57■□□□□ 0.088e-7■■■■■ 29.1
VARS2-201ENST00000321897 ITGA11Q9UKX5 1188 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 TJP1Q07157 1748 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 THP07101 528 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 UQCRBP14927 111 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 NAA20P61599 178 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 SGO1Q5FBB7 561 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 TMTC4Q5T4D3 741 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 RNASEH2BQ5TBB1 312 aaKnown RBP15.57■□□□□ 0.08
VARS2-201ENST00000321897 UNC5AQ6ZN44 842 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 R3HDMLQ9H3Y0 253 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 ST6GALNAC4Q9H4F1 302 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 LIN28AQ9H9Z2 209 aaKnown RBP15.57■□□□□ 0.08
VARS2-201ENST00000321897 ZNF358Q9NW07 568 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 SLC7A8Q9UHI5 535 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 NFASCO94856 1347 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 CACNA1SQ13698 1873 aa15.57■□□□□ 0.08
VARS2-201ENST00000321897 LAMB4A4D0S4 1761 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 ATP6AP2A0A1C7CYW4 349 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 AGRPO00253 132 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 CCL22O00626 93 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 ATP6AP2O75787 350 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 ACADSBP45954 432 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 CTBP1Q13363 440 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 FBXO48Q5FWF7 155 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 C10orf120Q5SQS8 335 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 C6orf52Q5T4I8 152 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 CHSY1Q86X52 802 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 BBS5Q8N3I7 341 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 SNX31Q8N9S9 440 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 BHLHE22Q8NFJ8 381 aaPredicted RBP15.56■□□□□ 0.08
VARS2-201ENST00000321897 DGCR14Q96DF8 476 aaKnown RBP15.56■□□□□ 0.08
VARS2-201ENST00000321897 ZNF512Q96ME7 567 aaPredicted RBP15.56■□□□□ 0.08
VARS2-201ENST00000321897 NDEL1Q9GZM8 345 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 CDY2AQ9Y6F7 541 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 CDY1Q9Y6F8 540 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 ITGA2BP08514 1039 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 CCNB1P14635 433 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 PERM1Q5SV97 790 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 CASP10Q92851 521 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 SERAC1Q96JX3 654 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 SENP8Q96LD8 212 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 BEGAINQ9BUH8 593 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 KCNK4Q9NYG8 393 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 ATP11BQ9Y2G3 1177 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 SNX5Q9Y5X3 404 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 MYH7BA7E2Y1 1941 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 C17orf102A2RUQ5 167 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 PSMD7P51665 324 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 MRPS15P82914 257 aaKnown RBP15.56■□□□□ 0.08
VARS2-201ENST00000321897 TWF1Q12792 350 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 TMCO5AQ8N6Q1 288 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 JADE3Q92613 823 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 HAPLN2Q9GZV7 340 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 GID8Q9NWU2 228 aa15.56■□□□□ 0.08
VARS2-201ENST00000321897 C4AP0C0L4 1744 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 C4BP0C0L5 1744 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 SMIM31A0A1B0GVY4 71 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 HOXC6P09630 235 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 GM2AP17900 193 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 ERCC2P18074 760 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 PTPN7P35236 360 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 C6orf10Q5SRN2 563 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 CCDC185Q8N715 623 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 PPHLN1Q8NEY8 458 aaKnown RBP15.55■□□□□ 0.08
VARS2-201ENST00000321897 RMND5BQ96G75 393 aaPredicted RBP15.55■□□□□ 0.08
VARS2-201ENST00000321897 PNPOQ9NVS9 261 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 CRYL1Q9Y2S2 319 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 MFHAS1Q9Y4C4 1052 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 COL4A1P02462 1669 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 ERI2A8K979 691 aaKnown RBP15.55■□□□□ 0.08
VARS2-201ENST00000321897 SLC26A2P50443 739 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 DLG1Q12959 904 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 CBX3Q13185 183 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 ITGADQ13349 1161 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 DCAF4L1Q3SXM0 396 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 SPDYAQ5MJ70 313 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 CERCAMQ5T4B2 595 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 EMC10Q5UCC4 262 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 MPP5Q8N3R9 675 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.55■□□□□ 0.08
VARS2-201ENST00000321897 C7orf43Q8WVR3 580 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 PBXIP1Q96AQ6 731 aa15.55■□□□□ 0.08
VARS2-201ENST00000321897 TEPSINQ96N21 525 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms