RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 H3BSA7 217 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 RNF103O00237 685 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 COQ9O75208 318 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 CCDC166P0CW27 439 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 MCF2P10911 925 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 PSMB4P28070 264 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 MAGEA12P43365 314 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 PTPN9P43378 593 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 ADARP55265 1226 aaKnown RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 RBP5P82980 135 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 TMED1Q13445 227 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 OLIG2Q13516 323 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 CNGA3Q16281 694 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 P2RY11Q96G91 374 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 CPNE1Q99829 537 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 MRPL45Q9BRJ2 306 aaKnown RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 PDZD7Q9H5P4 517 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 WDR55Q9H6Y2 383 aaPredicted RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 TCF7L2Q9NQB0 619 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 EIF2B3Q9NR50 452 aaKnown RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 NME7Q9Y5B8 376 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 NOP56O00567 594 aaKnown RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 POLBP06746 335 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 DPEP1P16444 411 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 THOP1P52888 689 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 MRPS22P82650 360 aaKnown RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 DLG2Q15700 870 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 AMHR2Q16671 573 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 SOWAHAQ2M3V2 549 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 GRTP1Q5TC63 336 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 KLC3Q6P597 504 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 PLPPR4Q7Z2D5 763 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 HACE1Q8IYU2 909 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 TDRD5Q8NAT2 981 aaKnown RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 NAT9Q9BTE0 207 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 PRMT7Q9NVM4 692 aaPredicted RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 HACD1B0YJ81 288 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 SRGAP2BP0DMP2 458 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 CCDC130P13994 396 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 PIK3R1P27986 724 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 MAGEA10P43363 369 aaPredicted RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 IRF9Q00978 393 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 C6orf52Q5T4I8 152 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 FSTL4Q6MZW2 842 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 DSELQ8IZU8 1212 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 AFG1LQ8WV93 481 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 ISL2Q96A47 359 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 PPP1R36Q96LQ0 422 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 CATSPER2Q96P56 530 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 CDRT15Q96T59 188 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 CAB39LQ9H9S4 337 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 ACSS2Q9NR19 701 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 AP4B1Q9Y6B7 739 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 AK5Q9Y6K8 562 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 EVPLQ92817 2033 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 MFSD11O43934 449 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 LTFP02788 710 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 CHRNGP07510 517 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 THRAP10827 490 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 XRCC1P18887 633 aaPredicted RBP13.73□□□□□ -0.21
SKA3-202ENST00000314759 GARSP41250 739 aaKnown RBP13.73□□□□□ -0.21
SKA3-202ENST00000314759 ABCG1P45844 678 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 TNFAIP2Q03169 654 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 KYQ8NBH2 561 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 AGAP2Q99490 1192 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 RBBP8Q99708 897 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 SEPT10Q9P0V9 454 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 CIDEBQ9UHD4 219 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 PRPF19Q9UMS4 504 aaKnown RBP13.73□□□□□ -0.21
SKA3-202ENST00000314759 RGSL1A5PLK6 1076 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 AMHP03971 560 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 CDKL1Q00532 357 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 FLOT2Q14254 428 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 ZNF423Q2M1K9 1284 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 CELF3Q5SZQ8 465 aaKnown RBP13.73□□□□□ -0.21
SKA3-202ENST00000314759 STRA8Q7Z7C7 330 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 LILRA2Q8N149 483 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 RIN3Q8TB24 985 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 LRGUKQ96M69 825 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 MRPL1Q9BYD6 325 aaKnown RBP13.73□□□□□ -0.21
SKA3-202ENST00000314759 LIN28AQ9H9Z2 209 aaKnown RBP13.73□□□□□ -0.21
SKA3-202ENST00000314759 RIMS3Q9UJD0 308 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 RAB26Q9ULW5 256 aa13.73□□□□□ -0.21
SKA3-202ENST00000314759 A0A087WZ62 844 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 A0A096LPK6 155 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 TMEM114B3SHH9 223 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 BTBD19C9JJ37 291 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 NEMP1O14524 444 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 TRIM13O60858 407 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 STAU1O95793 577 aaKnown RBP13.72□□□□□ -0.21
SKA3-202ENST00000314759 SETSIPP0DME0 302 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 MAGEA8P43361 318 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 LIMK2P53671 638 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 ATXN3P54252 364 aaPredicted RBP13.72□□□□□ -0.21
SKA3-202ENST00000314759 MS4A2Q01362 244 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 CYLC2Q14093 348 aaPredicted RBP13.72□□□□□ -0.21
SKA3-202ENST00000314759 ADGRE1Q14246 886 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 PIGGQ5H8A4 983 aa13.72□□□□□ -0.21
SKA3-202ENST00000314759 RARS2Q5T160 578 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms