RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
RNF4-201ENST00000314289 TMEM173Q86WV6 379 aaPredicted RBP12.72□□□□□ -0.37
RNF4-201ENST00000314289 MIB1Q86YT6 1006 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 ABI1Q8IZP0 508 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 ARMC2Q8NEN0 867 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 FCRL2Q96LA5 508 aaPredicted RBP12.72□□□□□ -0.37
RNF4-201ENST00000314289 IQCGQ9H095 443 aaKnown RBP12.72□□□□□ -0.37
RNF4-201ENST00000314289 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
RNF4-201ENST00000314289 FETUBQ9UGM5 382 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 RPS6KL1Q9Y6S9 549 aa12.72□□□□□ -0.37
RNF4-201ENST00000314289 EME2A4GXA9 379 aaPredicted RBP12.71□□□□□ -0.37
RNF4-201ENST00000314289 KRT37O76014 449 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 MT-CYBP00156 380 aaPredicted RBP12.71□□□□□ -0.37
RNF4-201ENST00000314289 SNRPAP09012 282 aaKnown RBP12.71□□□□□ -0.37
RNF4-201ENST00000314289 RASA2Q15283 850 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 SH2D5Q6ZV89 423 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 LRRC8DQ7L1W4 858 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 TFAP2DQ7Z6R9 452 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 C14orf80Q86SX3 495 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 ZNF276Q8N554 614 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 FCRL3Q96P31 734 aaPredicted RBP12.71□□□□□ -0.37
RNF4-201ENST00000314289 FERMT1Q9BQL6 677 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 PPCSQ9HAB8 311 aa12.71□□□□□ -0.37
RNF4-201ENST00000314289 IRAK2O43187 625 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.38
RNF4-201ENST00000314289 EDF1O60869 148 aaKnown RBP12.71□□□□□ -0.38
RNF4-201ENST00000314289 SPAG6O75602 509 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 RFPL1O75677 317 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.38
RNF4-201ENST00000314289 HOXD10P28358 340 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 DSC1Q08554 894 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 CTXN3Q4LDR2 81 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 PLEKHG4Q58EX7 1191 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 C16orf46Q6P387 395 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 LRRC8BQ6P9F7 803 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 NDUFAF2Q8N183 169 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 URGCPQ8TCY9 931 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 MFSD3Q96ES6 412 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 PGAP3Q96FM1 320 aaPredicted RBP12.71□□□□□ -0.38
RNF4-201ENST00000314289 APOPT1Q96IL0 206 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 MLPHQ9BV36 600 aaPredicted RBP12.71□□□□□ -0.38
RNF4-201ENST00000314289 ATXN3LQ9H3M9 355 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 PNPLA8Q9NP80 782 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 NKX1-2Q9UD57 310 aaPredicted RBP12.71□□□□□ -0.38
RNF4-201ENST00000314289 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.38
RNF4-201ENST00000314289 ARHGAP42A6NI28 874 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 H0Y3Z8 333 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 CABYRO75952 493 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 SKIP12755 728 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 TARSP26639 723 aaKnown RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 CCL23P55773 120 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 PPIDQ08752 370 aaKnown RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 GPNMBQ14956 572 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 RSPO2Q6UXX9 243 aaPredicted RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 RFWD2Q8NHY2 731 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 ZNF778Q96MU6 729 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 SEPT5Q99719 369 aaPredicted RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 FRMD8Q9BZ67 464 aaPredicted RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 CRISPLD1Q9H336 500 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 MANSC1Q9H8J5 431 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 GMIPQ9P107 970 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 PRKAG3Q9UGI9 489 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 CASP8AP2Q9UKL3 1982 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 FAM159BA6NKW6 160 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 TSHRP16473 764 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 ABL2P42684 1182 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 IRX1P78414 480 aaPredicted RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 EFEMP1Q12805 493 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 PPM1JQ5JR12 505 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 ZCCHC23Q6ZST2 131 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 ASRGL1Q7L266 308 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 SPNS2Q8IVW8 549 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 CNTD1Q8N815 330 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 ZNF669Q96BR6 464 aaPredicted RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 ERP27Q96DN0 273 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 UROC1Q96N76 676 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 AGAP2Q99490 1192 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 OSBPL1AQ9BXW6 950 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 CHRAC1Q9NRG0 131 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 ABCC13Q9NSE7 274 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 VANGL2Q9ULK5 521 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 NLRC5Q86WI3 1866 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 A0A0G2JND7 137 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 TRDMT1O14717 391 aaKnown RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 CPB1P15086 417 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 NEK3P51956 506 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 MAPRE1Q15691 268 aaKnown RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 ZNF449Q6P9G9 518 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 C4orf22Q6V702 233 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 PDZD4Q76G19 769 aaPredicted RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 TAS1R1Q7RTX1 841 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 ZNF296Q8WUU4 475 aaPredicted RBP12.7□□□□□ -0.38
RNF4-201ENST00000314289 LRRC39Q96DD0 335 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 HHIPL1Q96JK4 782 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 MYLK2Q9H1R3 596 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 MOCS1Q9NZB8 636 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms