RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SERGEFQ9UGK8 458 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 STAP1Q9ULZ2 295 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 TBC1D30Q9Y2I9 924 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 IGLV3-10A0A075B6K4 115 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 DRGXA6NNA5 263 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 GOLGA8SH3BPF8 625 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 TEX33O43247 280 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 GJB3O75712 270 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 STAT1P42224 750 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 VASPP50552 380 aaPredicted RBP20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 ECT2LQ008S8 904 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 UBXN1Q04323 297 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 MTA1Q13330 715 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 RABGAP1LQ5R372 815 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 DCAF12L1Q5VU92 463 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 EMC1Q8N766 993 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 SLC30A5Q8TAD4 765 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 RNF34Q969K3 372 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 CFAP57Q96MR6 1250 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 SYT11Q9BT88 431 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 C6orf106Q9H6K1 298 aaPredicted RBP20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 WDCPQ9H6R7 721 aa20.42■□□□□ 0.86
PDZRN3-202ENST00000308537 TCRBV5S1A1TA0A578 114 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 TARSL2A2RTX5 802 aaKnown RBP20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 GIPC1O14908 333 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 GJB6O95452 261 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 CFIP05156 583 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 ACADMP11310 421 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 VAV1P15498 845 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 GSCP56915 257 aaPredicted RBP20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 BNC1Q01954 994 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 N4BP2L1Q5TBK1 243 aaPredicted RBP20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 FAM124AQ86V42 546 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 OR2I1PQ8NGU4 316 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 JOSD2Q8TAC2 188 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 FEM1AQ9BSK4 669 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 PCED1AQ9H1Q7 454 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 METTL5Q9NRN9 209 aaKnown RBP20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 PLXNA2O75051 1894 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 DOCK9Q9BZ29 2069 aa20.41■□□□□ 0.86
PDZRN3-202ENST00000308537 ARHGAP33O14559 1287 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 F9P00740 461 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 TPM2P07951 284 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 MAPK8P45983 427 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 ST8SIA6P61647 398 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 DEUP1Q05D60 604 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 WDR45BQ5MNZ6 344 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 SH3PXD2AQ5TCZ1 1133 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 ZNF776Q68DI1 518 aaPredicted RBP20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 PIP4P1Q86T03 277 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 NEK11Q8NG66 645 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 BAP1Q92560 729 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 C1orf74Q96LT6 269 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 SPAG5Q96R06 1193 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 PSMB7Q99436 277 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 C11orf70Q9BRQ4 267 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 SIK2Q9H0K1 926 aa20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 PABPC3Q9H361 631 aaKnown RBP20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 RTN4Q9NQC3 1192 aaKnown RBP20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.4■□□□□ 0.86
PDZRN3-202ENST00000308537 EDDM13A0A1B0GTR0 161 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 C2CD4BA6NLJ0 364 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 CLDN11O75508 207 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 MOCS3O95396 460 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 CSRP1P21291 193 aaKnown RBP20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 PMLP29590 882 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 CDH4P55283 916 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 SEMA3BQ13214 749 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 IQCB1Q15051 598 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 CST6Q15828 149 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 CLEC16AQ2KHT3 1053 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 CCDC14Q49A88 953 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 SYCP2LQ5T4T6 812 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 DAB2IPQ5VWQ8 1189 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 CAVIN1Q6NZI2 390 aaKnown RBP20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 TRIM72Q6ZMU5 477 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 USP30Q70CQ3 517 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 RABEPKQ7Z6M1 372 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 PHLDB2Q86SQ0 1253 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 PHF13Q86YI8 300 aaPredicted RBP20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 CCDC117Q8IWD4 279 aaPredicted RBP20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 RGL4Q8IZJ4 473 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 ZCCHC9Q8N567 271 aaKnown RBP20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 CENPIQ92674 756 aaPredicted RBP20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 FAM131CQ96AQ9 280 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 EIF2B4Q9UI10 523 aaKnown RBP20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 NEU3Q9UQ49 428 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 TP53BP1Q12888 1972 aaPredicted RBP20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 TMEM131Q92545 1883 aa20.39■□□□□ 0.85
PDZRN3-202ENST00000308537 MID1O15344 667 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 ATP9BO43861 1147 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 SEMA4FO95754 770 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 DNTTP04053 509 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 RDXP35241 583 aaKnown RBP20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 GFPT1Q06210 699 aaPredicted RBP20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 SULT2A1Q06520 285 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 C15orf59Q2T9L4 293 aaPredicted RBP20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 MANEALQ5VSG8 457 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 PSAPL1Q6NUJ1 521 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 MON1BQ7L1V2 547 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms